Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP3Q9BZ76 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.27□□□□□ -1.57
CNTNAP3Q9BZ76 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP3Q9BZ76 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CNTNAP3Q9BZ76 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 MIR133B-201ENST00000362210 119 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 RNU4-84P-201ENST00000364200 139 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 Y_RNA.286-201ENST00000364813 102 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 Y_RNA.331-201ENST00000365267 102 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 RNU6-701P-201ENST00000384059 107 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 Y_RNA.623-201ENST00000411128 95 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC092809.3-201ENST00000415453 231 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 OOSP1P1-201ENST00000423265 274 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AL160275.3-201ENST00000423876 471 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AL590399.2-201ENST00000427536 309 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 RNU6-677P-201ENST00000516914 101 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 MIR2355-201ENST00000517199 87 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 HMGB1P40-201ENST00000525121 540 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 BRDTP1-201ENST00000605735 677 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC037487.3-201ENST00000606668 112 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 uc_338.26-201ENST00000612659 160 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AL591926.4-201ENST00000616895 298 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AC034229.5-201ENST00000624258 185 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AP001541.1-201ENST00000623322 1904 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 BCORP1-203ENST00000513194 5093 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 AL022311.1-201ENST00000623726 19416 ntBASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CNTNAP3Q9BZ76 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC133552.1-201ENST00000569988 4007 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 RNU6-429P-201ENST00000384582 108 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 RNU6-146P-201ENST00000384602 108 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 MIR190B-201ENST00000401119 79 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 RN7SKP151-201ENST00000410230 316 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 RNA5SP44-201ENST00000410446 133 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AL391219.1-201ENST00000422570 483 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 REREP1Y-201ENST00000422655 198 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 RPS26P47-201ENST00000427219 348 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 REREP2Y-201ENST00000439103 200 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 RPS11P1-201ENST00000451072 473 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC010631.1-201ENST00000474150 156 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC020593.1-201ENST00000507399 299 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 IGKV2D-36-201ENST00000518643 226 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC022790.1-201ENST00000522872 204 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC021006.3-201ENST00000530771 192 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 MIR4716-201ENST00000579628 84 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 MIR4659A-201ENST00000580269 81 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 BDH2P1-201ENST00000602288 736 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AL034351.1-201ENST00000605288 668 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 SNORD113-5-201ENST00000607261 78 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC039056.2-201ENST00000622261 511 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC008873.1-201ENST00000625051 138 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC000095.2-202ENST00000637415 154 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC125336.1-201ENST00000508893 2827 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC008568.2-201ENST00000623862 2313 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC005005.4-201ENST00000623789 16698 ntBASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
CNTNAP3Q9BZ76 AC020656.2-201ENST00000613291 5309 ntBASIC5.24□□□□□ -1.57
CNTNAP3Q9BZ76 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
CNTNAP3Q9BZ76 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.24□□□□□ -1.57
CNTNAP3Q9BZ76 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CNTNAP3Q9BZ76 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms