Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP4-3Q9BYR4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC005336.3-201ENST00000623833 2679 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 DPY19L2P2-203ENST00000435536 1858 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC239868.2-201ENST00000564237 4527 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC004076.2-201ENST00000620532 3323 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 CUL1P1-201ENST00000509510 2425 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL356292.1-201ENST00000283110 373 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC092268.1-201ENST00000342691 405 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5SP183-201ENST00000362452 119 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-492P-201ENST00000363035 104 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 snoU2_19.4-201ENST00000364329 80 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1082P-201ENST00000364574 107 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.368-201ENST00000365547 113 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-395P-201ENST00000365662 106 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1329P-201ENST00000365664 107 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORD116-22-201ENST00000384430 92 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR105-2-201ENST00000385083 81 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR223-201ENST00000385204 110 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU1-149P-201ENST00000390870 161 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORD70.1-201ENST00000391007 85 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5SP105-201ENST00000391123 113 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR190B-201ENST00000401119 79 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 GSTA12P-201ENST00000402398 508 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL451046.2-201ENST00000403074 277 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL590004.2-201ENST00000404787 371 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-77P-201ENST00000410554 91 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5SP251-201ENST00000410614 137 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 CYCSP49-201ENST00000420810 319 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 PPP1R11P2-201ENST00000423543 382 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 EI24P4-201ENST00000423683 1078 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL21P66-201ENST00000426566 466 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC093156.1-201ENST00000440382 670 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 HMGB3P8-201ENST00000449709 577 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL121914.1-201ENST00000450188 156 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AZGP1P2-201ENST00000454506 345 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 U8.22-201ENST00000459141 133 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC073901.1-201ENST00000462471 408 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RN7SL610P-201ENST00000463845 291 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC009127.1-201ENST00000467090 155 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL31P50-201ENST00000471002 296 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 HMGN2P13-201ENST00000476476 274 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC005726.1-201ENST00000494679 427 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC005921.1-201ENST00000510589 286 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5SP135-201ENST00000517019 125 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 EIF4A2P5-201ENST00000529914 499 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC027667.1-201ENST00000545814 304 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC008147.3-201ENST00000548666 354 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL358913.1-201ENST00000554342 121 ntBASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC1.84□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR4301-201ENST00000577203 66 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms