Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC012321.1-201ENST00000561622 1588 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MIR21-201ENST00000362134 72 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 Y_RNA.25-201ENST00000362528 102 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 U8.8-201ENST00000365399 135 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MIR518C-201ENST00000384822 101 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 RPL23AP29-201ENST00000397284 453 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 RNU2-25P-201ENST00000411041 191 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 RAD23BP2-201ENST00000416003 1207 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 TXNL1P1-201ENST00000429528 554 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MTND2P22-201ENST00000444325 1033 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 SNORD109B-201ENST00000458961 67 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 SNORD109A-201ENST00000459128 67 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MTND1P16-201ENST00000465177 898 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 BET1P1-201ENST00000482276 359 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 LTV1P1-201ENST00000510683 1237 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 RNU6-759P-201ENST00000516740 103 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 SNORA31.21-201ENST00000517180 77 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 OR5AK1P-201ENST00000524837 922 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC125611.1-201ENST00000549563 229 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 SULT1C2P1-202ENST00000562418 459 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MIR4319-201ENST00000577285 85 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC011260.1-201ENST00000578420 472 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 RPL23AP78-201ENST00000599928 470 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AL009028.1-201ENST00000604895 802 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC072039.2-201ENST00000608883 439 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AL137847.3-201ENST00000611521 109 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 AC007671.2-201ENST00000637344 619 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 CDR1-202ENST00000625883 1485 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 MTND5P28-201ENST00000438005 1594 ntBASIC2.32□□□□□ -2.04
RSPO3Q9BXY4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 MIR6073-201ENST00000352083 89 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNU6-931P-201ENST00000363850 107 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNA5SP139-201ENST00000364340 117 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNU4-40P-201ENST00000364351 143 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC016769.3-201ENST00000396562 315 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AL590084.2-201ENST00000401481 382 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNU2-28P-201ENST00000410457 189 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC073264.1-201ENST00000411508 416 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC098592.1-201ENST00000419352 333 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 MTND2P20-201ENST00000440805 661 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC104073.1-201ENST00000451988 151 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AL109933.2-201ENST00000452651 260 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 HMGN3P1-201ENST00000453847 193 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 UBL5P3-201ENST00000475112 231 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNU6-237P-201ENST00000515985 71 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNA5SP320-201ENST00000516263 124 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 RNU6-826P-201ENST00000516827 104 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 ARL2BPP5-201ENST00000523141 481 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 SLC2A13P1-201ENST00000531560 322 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC090888.1-201ENST00000561335 1141 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AP005136.1-201ENST00000579765 429 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 VN1R82P-201ENST00000601481 356 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC018714.1-201ENST00000605028 208 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC006270.3-201ENST00000605967 1036 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AL136981.2-201ENST00000617319 734 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC078883.4-201ENST00000623218 367 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 AC005539.1-201ENST00000443768 1479 ntBASIC2.31□□□□□ -2.04
RSPO3Q9BXY4 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms