Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 Y_RNA.802-201ENST00000614892 130 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 snoU18.1-201ENST00000629629 71 ntBASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
SSBP4Q9BWG4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 SRRM1P3-201ENST00000426911 2678 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 ZNF204P-201ENST00000416749 2397 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP346-201ENST00000363541 121 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 SNORD14B-201ENST00000364533 90 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 RNU4-17P-201ENST00000365598 141 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 RNU6-968P-201ENST00000384076 107 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 SNORA20-201ENST00000384662 132 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AL139100.1-201ENST00000408001 498 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP56-201ENST00000410277 118 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AL138479.1-201ENST00000426913 484 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AL353705.4-201ENST00000449661 238 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 PPIAP7-201ENST00000454070 489 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC087588.1-201ENST00000462203 316 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 RN7SL83P-201ENST00000468131 297 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AP000870.1-201ENST00000472927 406 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 RNA5SP471-201ENST00000516971 106 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 SUMO2P18-201ENST00000518873 252 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC103564.3-201ENST00000621194 220 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 AC000123.3-201ENST00000624029 4975 ntBASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSBP4Q9BWG4 FANCD2P2-201ENST00000437591 1400 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 U3.7-201ENST00000363668 216 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 RNU4-11P-201ENST00000365287 132 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 MIR32-201ENST00000384965 70 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 MIR153-2-201ENST00000385225 87 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AL022722.2-201ENST00000402519 180 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 GPS2P1-201ENST00000411761 986 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC099670.1-201ENST00000455141 783 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC005532.2-201ENST00000467154 373 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 RPL23AP75-201ENST00000491601 451 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 GM2AP2-201ENST00000491764 562 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 SNORA31.22-201ENST00000517204 135 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC024940.3-201ENST00000538551 316 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC002310.3-201ENST00000569728 723 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 MIR378H-201ENST00000579966 83 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC005296.1-201ENST00000616145 209 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC004825.2-201ENST00000616634 455 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 AC009229.4-201ENST00000623854 1947 ntBASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.38□□□□□ -1.71
SSBP4Q9BWG4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 AC009541.1-201ENST00000438279 2662 ntBASIC4.37□□□□□ -1.71
SSBP4Q9BWG4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms