Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.339-201ENST00000365325 102 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 SNORA4.3-201ENST00000365564 137 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 RNU6-738P-201ENST00000384531 106 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 MIR559-201ENST00000385188 96 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 MIR1911-201ENST00000410783 80 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 SSXP9-201ENST00000417503 292 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 RPS12P23-201ENST00000419579 400 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.639-201ENST00000458981 102 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC010631.1-201ENST00000474150 156 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 RN7SL691P-201ENST00000494487 301 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.654-201ENST00000497848 106 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC104806.1-201ENST00000508720 308 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 RNA5SP519-201ENST00000516480 119 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 RNU6-1088P-201ENST00000516850 104 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AL137161.1-201ENST00000532231 390 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 ELOCP31-201ENST00000540463 467 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AL121603.1-201ENST00000553815 142 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AL592436.1-201ENST00000605135 558 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC245389.1-201ENST00000605141 529 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AL627309.6-201ENST00000606857 840 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 LINC01109-201ENST00000603837 3081 ntBASIC4.07□□□□□ -1.76
NDC1Q9BTX1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NDC1Q9BTX1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 API5P2-201ENST00000397055 1498 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 XIAPP3-201ENST00000312918 795 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNA5SP388-201ENST00000362584 119 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNU6-1287P-201ENST00000362914 107 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.216-201ENST00000364205 93 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 SNORA23-201ENST00000365128 182 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 SNORD3H-201ENST00000384486 214 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNU6-1060P-201ENST00000384664 107 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 SOD2P1-201ENST00000396543 562 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL022722.2-201ENST00000402519 180 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL592114.1-201ENST00000403842 483 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 MIR548F5-201ENST00000408421 86 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNU6-387P-201ENST00000411331 105 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RPL7P46-201ENST00000425129 740 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC090774.1-201ENST00000435925 246 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RPL23AP46-201ENST00000438548 490 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 Y_RNA.635-201ENST00000459041 101 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC012181.1-201ENST00000479895 423 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC106872.2-201ENST00000494303 480 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RPL23AP55-201ENST00000498163 452 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC108078.2-201ENST00000510750 236 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC005741.1-201ENST00000511094 432 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNU6-390P-201ENST00000516259 103 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 RNA5SP73-201ENST00000516744 108 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 IGLV3-26-201ENST00000520756 302 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC093012.1-202ENST00000549403 582 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 HMGB3P26-201ENST00000560051 582 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC080078.3-201ENST00000605407 463 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 Z82243.1-201ENST00000609432 473 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AC040896.1-201ENST00000613819 479 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AL445363.3-201ENST00000623080 671 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
NDC1Q9BTX1 Z73965.1-201ENST00000623412 2297 ntBASIC4.06□□□□□ -1.76
NDC1Q9BTX1 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms