Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
YIPF4Q9BSR8 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
YIPF4Q9BSR8 OR51H2P-202ENST00000641424 3046 ntBASIC4.45□□□□□ -1.7
YIPF4Q9BSR8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RNU6-1115P-201ENST00000362490 106 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RNA5SP87-201ENST00000384155 118 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RPS16P5-201ENST00000406501 404 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL645608.4-201ENST00000423619 154 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RPS29P33-201ENST00000456717 146 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RPL21P104-201ENST00000464143 478 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RN7SL432P-201ENST00000484057 298 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC008897.1-201ENST00000494006 347 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RPL23AP55-201ENST00000498163 452 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC008526.1-201ENST00000509149 338 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 TBCAP3-201ENST00000512475 312 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 RPL39P5-202ENST00000512505 151 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 GMPSP1-201ENST00000514075 579 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC134698.5-201ENST00000519444 336 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 MED28P6-201ENST00000558776 231 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 MIR5699-201ENST00000578903 90 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 MIR3667-201ENST00000581025 74 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL670379.6-201ENST00000603753 252 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 CYP2C61P-201ENST00000604072 290 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC008162.1-201ENST00000604718 254 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL670379.1-201ENST00000604752 252 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL670379.5-201ENST00000605253 252 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL670379.8-201ENST00000605353 252 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL670379.7-201ENST00000605823 252 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC012409.4-201ENST00000612923 249 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 SDR42E1P2-201ENST00000614861 481 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 uc_338.18-201ENST00000615451 175 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL132822.1-201ENST00000617063 513 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 7SK.10-201ENST00000621414 298 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 AL137003.2-201ENST00000606924 2538 ntBASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.44□□□□□ -1.7
YIPF4Q9BSR8 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC010733.2-201ENST00000589496 5702 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 GABPAP-201ENST00000419271 1356 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RNU1-83P-201ENST00000363426 164 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RNU6-701P-201ENST00000384059 107 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 SNORA36C-201ENST00000384289 132 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 Y_RNA.482-201ENST00000384377 111 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RNU6-601P-201ENST00000384540 107 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AL360182.1-201ENST00000397433 468 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 MIR1290-201ENST00000408735 78 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RN7SKP100-201ENST00000411258 284 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC114755.2-201ENST00000413520 361 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AL590139.1-201ENST00000416267 400 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RPL27AP8-201ENST00000424277 446 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 CYCSP43-201ENST00000438233 310 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AF228730.2-201ENST00000438784 848 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AURKAPS2-201ENST00000454983 333 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC087884.1-201ENST00000469738 328 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AL135752.1-201ENST00000479477 471 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC092451.1-201ENST00000480211 153 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 HIGD1AP13-201ENST00000509878 289 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RNU6-123P-201ENST00000516163 102 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 RNU2-58P-201ENST00000516403 183 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AP002826.1-201ENST00000608835 315 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AL713922.2-201ENST00000619384 716 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 AL669831.3-213ENST00000636676 183 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 MTND5P10-201ENST00000603719 1809 ntBASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
YIPF4Q9BSR8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms