Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL671855.1-201ENST00000446875 1203 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 RNA5SP310-201ENST00000459084 116 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AL135752.1-201ENST00000479477 471 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 LINC00888-204ENST00000487386 421 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC055855.1-201ENST00000489563 579 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC083906.5-201ENST00000503722 328 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC005178.1-201ENST00000508392 440 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 MRPS33P3-201ENST00000513456 322 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC026801.2-201ENST00000515352 425 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 SCARNA15.2-201ENST00000516409 127 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 NRON-201ENST00000517270 370 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AP002404.1-201ENST00000532005 451 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 SETP2-201ENST00000553886 926 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 H3F3AP1-201ENST00000559984 334 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 MIR4429-201ENST00000580105 73 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC103710.4-201ENST00000609301 899 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC093838.1-201ENST00000613014 469 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC104010.1-201ENST00000616889 150 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC079248.2-201ENST00000623779 326 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC008568.2-201ENST00000623862 2313 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 AC092435.3-201ENST00000565538 3654 ntBASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HDHD3Q9BSH5 MTCO1P9-201ENST00000505577 1534 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 Y_RNA.18-201ENST00000362461 102 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 SNORA23-201ENST00000365128 182 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 RNU6-851P-201ENST00000384565 107 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 RNA5SP210-201ENST00000391034 120 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 RNA5SP38-201ENST00000410750 119 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 HMGB1P11-201ENST00000413899 637 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC018630.2-202ENST00000422992 927 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC234781.2-201ENST00000426370 994 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC112220.1-201ENST00000434628 355 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 TAAR7P-201ENST00000436141 242 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 UBE2V1P13-201ENST00000436983 439 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL049734.2-201ENST00000441066 616 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 CACYBPP2-201ENST00000453625 678 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC234775.1-201ENST00000454247 670 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 SETP11-201ENST00000473027 690 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC090525.1-201ENST00000479116 478 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC111000.2-201ENST00000507775 550 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL359273.1-201ENST00000510918 627 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 RNU6-1003P-201ENST00000517099 105 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC091489.2-201ENST00000566263 604 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 MIR4444-1-201ENST00000581696 74 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC090616.2-202ENST00000584248 222 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 MIR4444-2-201ENST00000584390 74 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC012493.2-201ENST00000595083 291 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 BNIP3P23-201ENST00000599655 511 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC112187.2-201ENST00000604345 283 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AP002826.1-201ENST00000608835 315 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 TUG1_2.1-201ENST00000614234 87 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AP000676.3-201ENST00000623299 569 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AP003485.2-201ENST00000623636 610 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 AC019226.1-201ENST00000625666 515 ntBASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.28□□□□□ -2.04
HDHD3Q9BSH5 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 CUL1P1-201ENST00000509510 2425 ntBASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 RNU6-270P-201ENST00000364131 105 ntBASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 RNU1-39P-201ENST00000383897 165 ntBASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 RNU5A-2P-201ENST00000384337 116 ntBASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 RNU6-1197P-201ENST00000391183 107 ntBASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 AL138885.1-201ENST00000405921 675 ntBASIC2.27□□□□□ -2.05
HDHD3Q9BSH5 RNU6-516P-201ENST00000411381 104 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 422.7 ms