Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-193P-201ENST00000410977 107 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPL7P8-201ENST00000411964 730 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 NANOGP5-201ENST00000424456 877 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC112653.1-201ENST00000443851 386 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 GAPDHP27-201ENST00000447427 1020 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.35□□□□□ -2.03
FOXC2Q99958 snoU13.8-201ENST00000458890 104 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPL21P39-201ENST00000463605 483 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPL21P93-201ENST00000480465 489 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC233702.1-201ENST00000482905 502 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC087190.1-201ENST00000484462 480 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC093591.1-201ENST00000491435 481 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPL21P16-201ENST00000495531 483 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 RPS29P21-201ENST00000496272 170 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC008837.2-201ENST00000513076 418 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AP003122.3-201ENST00000526316 255 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC2.35□□□□□ -2.03
FOXC2Q99958 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.35□□□□□ -2.03
FOXC2Q99958 MTCYBP23-201ENST00000558717 1102 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC090888.1-201ENST00000561335 1141 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AL049838.1-201ENST00000563647 981 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 MTND3P19-201ENST00000603825 345 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.35□□□□□ -2.03
FOXC2Q99958 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
FOXC2Q99958 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
FOXC2Q99958 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC084035.1-201ENST00000634543 607 ntBASIC2.35□□□□□ -2.03
FOXC2Q99958 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.35□□□□□ -2.03
FOXC2Q99958 AC022336.2-201ENST00000568966 2538 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.34□□□□□ -2.03
FOXC2Q99958 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
FOXC2Q99958 OR4G2P-202ENST00000641004 1759 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU5E-8P-201ENST00000363502 116 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU4-92P-201ENST00000363783 136 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU6-560P-201ENST00000364007 108 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 SNORD56.5-201ENST00000364281 72 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU1-112P-201ENST00000364401 164 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 Y_RNA.234-201ENST00000364409 97 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU6-359P-201ENST00000365466 108 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU6-952P-201ENST00000391164 108 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
FOXC2Q99958 RNA5SP344-201ENST00000411081 104 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RAP1BP1-201ENST00000412709 553 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.34□□□□□ -2.03
FOXC2Q99958 AL135786.1-201ENST00000415892 214 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC099548.1-201ENST00000421443 426 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 BX276092.3-201ENST00000424182 230 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC092047.1-201ENST00000424997 240 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 OR2AS1P-201ENST00000427827 319 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
FOXC2Q99958 RPL37P4-201ENST00000448908 268 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 MTND2P24-201ENST00000453434 806 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU7-136P-201ENST00000458819 69 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 MTND4LP3-201ENST00000468320 276 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
FOXC2Q99958 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
FOXC2Q99958 TPT1P8-201ENST00000510120 555 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 XKRY-201ENST00000510392 1100 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 RNU6-1256P-201ENST00000516539 103 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.34□□□□□ -2.03
FOXC2Q99958 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.34□□□□□ -2.03
FOXC2Q99958 AC005832.3-201ENST00000537929 631 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.34□□□□□ -2.03
FOXC2Q99958 AC015712.3-201ENST00000559380 164 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.34□□□□□ -2.03
FOXC2Q99958 AL132657.2-201ENST00000564417 358 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.34□□□□□ -2.03
FOXC2Q99958 AC068135.2-201ENST00000569293 1028 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.34□□□□□ -2.03
FOXC2Q99958 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.34□□□□□ -2.03
FOXC2Q99958 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.34□□□□□ -2.03
FOXC2Q99958 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC022960.3-201ENST00000619794 441 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 AC073308.1-201ENST00000623696 305 ntBASIC2.34□□□□□ -2.03
FOXC2Q99958 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.34□□□□□ -2.03
FOXC2Q99958 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.04
FOXC2Q99958 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
FOXC2Q99958 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
FOXC2Q99958 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
FOXC2Q99958 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
FOXC2Q99958 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
FOXC2Q99958 RNU6-621P-201ENST00000364752 109 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 SNORD116.1-201ENST00000365628 92 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 MIR627-201ENST00000384979 97 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
FOXC2Q99958 RNU6-1242P-201ENST00000391052 103 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 AL139039.1-201ENST00000401900 692 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 RNA5SP425-201ENST00000410336 112 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.33□□□□□ -2.04
FOXC2Q99958 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.33□□□□□ -2.04
FOXC2Q99958 AC092648.1-201ENST00000425870 423 ntBASIC2.33□□□□□ -2.04
FOXC2Q99958 AC008850.1-201ENST00000427546 362 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms