Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 Y_RNA.674-201ENST00000516362 113 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 HMGN1P28-201ENST00000521340 364 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AP000859.1-201ENST00000525536 307 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AC040958.1-201ENST00000561102 201 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 RN7SL802P-201ENST00000577858 299 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 RN7SL435P-201ENST00000584418 282 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 CR381572.2-201ENST00000624852 397 ntBASIC5.63□□□□□ -1.51
TRERF1Q96PN7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
TRERF1Q96PN7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC138393.1-203ENST00000327086 343 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AL357515.1-201ENST00000402967 542 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC016397.1-201ENST00000412463 242 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC119751.6-201ENST00000416712 186 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 SYF2P2-201ENST00000417620 583 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 RPL23AP25-201ENST00000430973 463 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 RPL23AP22-201ENST00000437556 453 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 RPL7AP61-201ENST00000443410 636 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 RPL23AP31-201ENST00000456160 467 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 SNORD121B-201ENST00000458838 81 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 RPS17P2-201ENST00000461663 408 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC084198.1-201ENST00000477747 402 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 RPL23AP55-201ENST00000498163 452 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC109329.1-201ENST00000518744 317 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC007991.1-201ENST00000522680 631 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AC004024.1-201ENST00000549244 247 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 AL590099.1-201ENST00000615276 138 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 BTBD10P1-201ENST00000549824 1352 ntBASIC5.62□□□□□ -1.51
TRERF1Q96PN7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRERF1Q96PN7 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 MIR298-201ENST00000401212 88 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 MIR1298-201ENST00000408783 112 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 CALM2P2-201ENST00000428512 440 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC005154.2-201ENST00000438110 379 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC005094.1-201ENST00000440420 368 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AL359893.1-201ENST00000447628 1580 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC000111.2-201ENST00000448200 210 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 FTH1P24-201ENST00000503502 462 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC074198.2-201ENST00000508153 258 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 RNU6-346P-201ENST00000516288 111 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC087441.2-201ENST00000529141 262 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 CBX3P8-201ENST00000532412 525 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 VN1R91P-201ENST00000594377 169 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AL138889.2-201ENST00000603883 242 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC002044.1-201ENST00000606707 158 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AL359547.2-201ENST00000615810 418 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC021753.1-201ENST00000635724 168 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 AC073869.10-201ENST00000642016 354 ntBASIC5.61□□□□□ -1.51
TRERF1Q96PN7 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRERF1Q96PN7 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRERF1Q96PN7 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRERF1Q96PN7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRERF1Q96PN7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRERF1Q96PN7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRERF1Q96PN7 AL391987.6-201ENST00000305671 199 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms