Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC138761.3-201ENST00000579993 334 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC061975.8-201ENST00000587058 721 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 UBE2L4-201ENST00000587688 464 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3□□□□□ -1.93
ZNF560Q96MR9 DUXAP4-201ENST00000603046 613 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC103710.4-201ENST00000609301 899 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC092106.3-201ENST00000611308 722 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 TUG1_2.1-201ENST00000614234 87 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AL158801.5-201ENST00000623123 465 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AP000676.4-201ENST00000624659 623 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3□□□□□ -1.93
ZNF560Q96MR9 ZNF876P-202ENST00000398732 1485 ntBASIC3□□□□□ -1.93
ZNF560Q96MR9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC092593.1-201ENST00000515413 1815 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 SNORA5B-201ENST00000363786 132 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RNU6-198P-201ENST00000384258 104 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 ANAPC10P1-201ENST00000395991 556 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RPL21P75-201ENST00000396599 483 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RPL21P28-201ENST00000401418 483 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL592114.1-201ENST00000403842 483 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL117351.1-201ENST00000438864 766 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 BMI1P1-201ENST00000445879 941 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 snoU13.28-201ENST00000459235 104 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RPL21P39-201ENST00000463605 483 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RPL21P93-201ENST00000480465 489 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC233702.1-201ENST00000482905 502 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC087190.1-201ENST00000484462 480 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC093591.1-201ENST00000491435 481 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC106872.3-201ENST00000495104 446 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RPL21P16-201ENST00000495531 483 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC020699.1-201ENST00000505161 445 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 CDC42P4-201ENST00000510507 563 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RNU6-928P-201ENST00000516876 104 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 NRON-201ENST00000517270 370 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC023538.1-201ENST00000534576 736 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC060771.1-201ENST00000582031 164 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 ZNF861P-201ENST00000588126 639 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL139344.1-201ENST00000605228 195 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC007619.2-201ENST00000605743 379 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC024560.3-201ENST00000608482 349 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC027449.1-201ENST00000608890 407 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL020991.1-201ENST00000612314 373 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AC004696.1-201ENST00000614345 607 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 AL161629.2-201ENST00000615347 275 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 SCARNA15.3-201ENST00000626315 122 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 SCARNA4.1-201ENST00000628597 123 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 LRRC77P-213ENST00000637727 880 ntBASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
ZNF560Q96MR9 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 RNU6-741P-201ENST00000383889 107 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 TXNP7-201ENST00000406296 293 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 RNA5SP21-201ENST00000410917 96 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC129850.1-201ENST00000436203 508 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 BNIP3P2-201ENST00000441221 577 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AL606517.1-201ENST00000446914 387 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 ANKRD26P4-201ENST00000455755 950 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC034244.1-201ENST00000507687 207 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 RNA5SP356-201ENST00000515972 94 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 SNORA31.21-201ENST00000517180 77 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AP002748.2-201ENST00000528671 348 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC068587.4-201ENST00000533893 186 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 TRAV28-201ENST00000557548 323 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC005951.2-201ENST00000576282 495 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AL357094.1-201ENST00000603845 844 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 ATP1B3P1-201ENST00000605365 821 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC010133.1-201ENST00000615809 842 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AP000676.3-201ENST00000623299 569 ntBASIC2.98□□□□□ -1.93
ZNF560Q96MR9 AC068787.1-201ENST00000623908 691 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms