Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.400-201ENST00000383963 111 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 MIR589-201ENST00000385238 99 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RPL21P67-201ENST00000402896 478 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RNU6-257P-201ENST00000410238 98 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.592-201ENST00000410274 109 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AL590233.1-201ENST00000430017 456 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC016696.1-201ENST00000446949 318 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RPL23AP55-201ENST00000498163 452 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RNU6-1333P-201ENST00000516162 93 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC010186.2-204ENST00000537668 439 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC040958.1-201ENST00000561102 201 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 MIR4675-201ENST00000577898 77 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AC098826.3-201ENST00000603823 466 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 AL049794.2-201ENST00000616301 365 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 ADAM5-202ENST00000399789 1942 ntBASIC5.85□□□□□ -1.47
TRIM47Q96LD4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.85□□□□□ -1.47
TRIM47Q96LD4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 SMG1P7-201ENST00000565246 2704 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC138393.1-203ENST00000327086 343 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.27-201ENST00000362540 103 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 RNA5SP258-201ENST00000362750 119 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 Y_RNA.127-201ENST00000363386 109 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 RNU1-85P-201ENST00000364127 164 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 RNU6-715P-201ENST00000365204 103 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 HMGN1P24-201ENST00000412282 298 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 COX5BP7-201ENST00000414780 274 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 RPS12P5-201ENST00000423449 371 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC093106.2-201ENST00000428212 385 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC010326.1-201ENST00000462726 602 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 RNU6-426P-201ENST00000516464 97 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 MIR4679-2-201ENST00000578358 77 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 CDRT1-208ENST00000630868 794 ntBASIC5.84□□□□□ -1.47
TRIM47Q96LD4 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
TRIM47Q96LD4 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM47Q96LD4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM47Q96LD4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC010266.2-201ENST00000564741 3255 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 Y_RNA.143-201ENST00000363520 106 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 RNU6-923P-201ENST00000364753 107 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC019155.1-201ENST00000382242 574 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC007098.1-201ENST00000420122 367 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 RPS26P40-201ENST00000435209 294 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 NUTF2P7-201ENST00000453086 375 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 RPL30P1-201ENST00000488676 339 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC006427.1-201ENST00000514359 712 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC100784.1-201ENST00000522790 310 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC022884.3-201ENST00000579571 248 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 SNORD39.2-201ENST00000579995 76 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM47Q96LD4 AL162424.1-201ENST00000602325 221 ntBASIC5.83□□□□□ -1.48
TRIM47Q96LD4 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms