Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 GSTA9P-201ENST00000406231 611 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX27Q96L92 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX27Q96L92 MTND3P17-201ENST00000416968 344 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL513477.1-202ENST00000417061 214 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX27Q96L92 MTCO1P39-201ENST00000426148 480 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AC137499.1-201ENST00000427602 88 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 FCF1P1-201ENST00000432690 571 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.03□□□□□ -1.76
SNX27Q96L92 C1DP4-201ENST00000455429 424 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL359385.1-201ENST00000456509 365 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX27Q96L92 MTCO2P29-201ENST00000465212 189 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AP002884.2-201ENST00000471647 395 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL049830.2-201ENST00000480072 201 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 TRBV12-2-201ENST00000489763 344 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 RPL9P6-201ENST00000492764 598 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AC097462.2-201ENST00000504623 481 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.03□□□□□ -1.76
SNX27Q96L92 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AC006270.2-201ENST00000578523 652 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 MIR3167-201ENST00000579623 85 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AL022154.1-201ENST00000604698 785 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AP000860.1-201ENST00000605250 559 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL592295.2-201ENST00000612578 206 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 AL603758.1-201ENST00000618654 241 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 C2orf27A-204ENST00000623058 969 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.03□□□□□ -1.76
SNX27Q96L92 AP001350.1-201ENST00000601906 1524 ntBASIC4.03□□□□□ -1.76
SNX27Q96L92 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SNX27Q96L92 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SNX27Q96L92 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SNX27Q96L92 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
SNX27Q96L92 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.03□□□□□ -1.77
SNX27Q96L92 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 Y_RNA.6-201ENST00000362350 114 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 RNA5SP107-201ENST00000411358 122 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX27Q96L92 ATP5A1P2-201ENST00000412323 255 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SNX27Q96L92 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX27Q96L92 ATP5HP2-201ENST00000433885 485 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX27Q96L92 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX27Q96L92 AC006480.1-201ENST00000449887 378 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX27Q96L92 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX27Q96L92 AC108078.1-201ENST00000508073 725 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.02□□□□□ -1.77
SNX27Q96L92 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX27Q96L92 RN7SKP244-201ENST00000516513 307 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 RNU6-64P-201ENST00000517119 105 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 RNU6-1073P-201ENST00000517182 106 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AC008489.1-201ENST00000524271 483 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX27Q96L92 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.02□□□□□ -1.77
SNX27Q96L92 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.02□□□□□ -1.77
SNX27Q96L92 AC012531.5-201ENST00000611375 151 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 TUG1_2.1-201ENST00000614234 87 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AL158209.2-201ENST00000619266 216 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AC068137.3-201ENST00000639191 341 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 AC073869.6-201ENST00000640656 341 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.02□□□□□ -1.77
SNX27Q96L92 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 TAB3P1-202ENST00000452645 1634 ntBASIC4.02□□□□□ -1.77
SNX27Q96L92 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SNX27Q96L92 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SNX27Q96L92 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SNX27Q96L92 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX27Q96L92 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX27Q96L92 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.01□□□□□ -1.77
SNX27Q96L92 RNU6-517P-201ENST00000384362 110 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 MIR490-201ENST00000384865 128 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 PPP1R11P2-201ENST00000423543 382 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 DUTP6-201ENST00000425573 462 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AC133104.1-201ENST00000429100 218 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 USP9YP28-201ENST00000435142 589 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AL451074.3-201ENST00000437709 472 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AL356535.1-201ENST00000440335 398 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.01□□□□□ -1.77
SNX27Q96L92 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.01□□□□□ -1.77
SNX27Q96L92 AL162389.1-201ENST00000449233 177 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 AL049714.1-201ENST00000466686 347 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SNX27Q96L92 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.01□□□□□ -1.77
SNX27Q96L92 AC010493.1-201ENST00000513479 292 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 RNU6-506P-201ENST00000516553 94 ntBASIC4.01□□□□□ -1.77
SNX27Q96L92 NARSP2-201ENST00000518524 679 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms