Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR3690-201ENST00000580266 75 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC008752.3-201ENST00000588113 712 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AL020991.1-201ENST00000612314 373 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AL591424.2-201ENST00000617023 128 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 MIR6875-201ENST00000617506 72 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 AL603758.1-201ENST00000618654 241 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.84□□□□□ -1.79
VPS50Q96JG6 AC010733.2-201ENST00000589496 5702 ntBASIC3.84□□□□□ -1.79
VPS50Q96JG6 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
VPS50Q96JG6 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
VPS50Q96JG6 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
VPS50Q96JG6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.84□□□□□ -1.8
VPS50Q96JG6 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 IPO8P1-201ENST00000455509 3109 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 RNU5E-4P-201ENST00000364931 120 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 RNA5SP235-201ENST00000365411 114 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 SNORA69-201ENST00000383895 132 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 SNORD3H-201ENST00000384486 214 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 RNU2-71P-201ENST00000411395 189 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 RPL21P24-201ENST00000413752 448 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC099677.1-201ENST00000420575 175 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC018630.2-202ENST00000422992 927 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL691449.1-201ENST00000426570 421 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 OR2AS1P-201ENST00000427827 319 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 ARF4P2-201ENST00000430209 526 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC016691.1-201ENST00000441321 413 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL162389.1-201ENST00000449233 177 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC006512.1-201ENST00000468816 291 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC083798.1-201ENST00000472671 131 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC118273.2-201ENST00000532092 465 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AC018630.1-201ENST00000541376 925 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL121579.1-201ENST00000555129 305 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 HMGB1P6-201ENST00000569046 646 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 MIR5684-201ENST00000585074 65 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL162413.1-201ENST00000603198 110 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL022099.1-201ENST00000604551 712 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL035413.2-201ENST00000604801 525 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL592436.1-201ENST00000605135 558 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 U6.42-201ENST00000618440 107 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 MIR6130-201ENST00000619419 109 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS50Q96JG6 DUXAP9-208ENST00000622815 614 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 MIR3662-201ENST00000637030 95 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 AP001350.1-201ENST00000601906 1524 ntBASIC3.83□□□□□ -1.8
VPS50Q96JG6 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS50Q96JG6 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS50Q96JG6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS50Q96JG6 RIOK3P1-201ENST00000418778 1528 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 CASC19-280ENST00000642102 1351 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS50Q96JG6 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 RN7SKP280-201ENST00000364196 304 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNA5SP97-201ENST00000365006 84 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNU5E-6P-201ENST00000365574 115 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNU6-877P-201ENST00000383868 107 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNU6-1074P-201ENST00000383995 104 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 Y_RNA.573-201ENST00000384763 105 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNU6-882P-201ENST00000391025 103 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 AL136372.1-201ENST00000403060 228 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 MIR1251-201ENST00000408552 70 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 RNU6ATAC-201ENST00000408749 126 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC006011.1-201ENST00000442758 349 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AL671855.1-201ENST00000446875 1203 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC010631.1-201ENST00000474150 156 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 VN1R105P-201ENST00000486595 910 ntBASIC3.82□□□□□ -1.8
VPS50Q96JG6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms