Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AC002545.1-201ENST00000592511 181 ntBASIC3.21□□□□□ -1.9
SIPA1Q96FS4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.21□□□□□ -1.9
SIPA1Q96FS4 PRELID3BP8-201ENST00000604148 295 ntBASIC3.21□□□□□ -1.9
SIPA1Q96FS4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.21□□□□□ -1.9
SIPA1Q96FS4 AC099778.2-201ENST00000610904 211 ntBASIC3.21□□□□□ -1.9
SIPA1Q96FS4 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
SIPA1Q96FS4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.9
SIPA1Q96FS4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIPA1Q96FS4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIPA1Q96FS4 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 RNU5A-8P-201ENST00000364102 114 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AP002088.1-201ENST00000382740 395 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 SNORA7.4-201ENST00000384249 137 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 U8.14-201ENST00000390843 143 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 RPL7P8-201ENST00000411964 730 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 RPL37P21-201ENST00000435890 276 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC129850.1-201ENST00000436203 508 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 CST9LP2-201ENST00000437612 320 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 MTCO1P42-201ENST00000457379 726 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC092798.1-201ENST00000458542 409 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 KC877373.1-201ENST00000479066 408 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC004263.1-201ENST00000479327 332 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC006483.1-201ENST00000487308 313 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC080014.1-201ENST00000496877 1201 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 OR5BM1P-201ENST00000512021 366 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC008885.1-201ENST00000514930 301 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 SNORA31.21-201ENST00000517180 77 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC007115.1-201ENST00000546853 234 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC007954.1-201ENST00000554198 494 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC093732.2-201ENST00000607950 274 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 OR10AB1P-201ENST00000609613 938 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC103710.1-201ENST00000610003 901 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AL161629.2-201ENST00000615347 275 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 SNHG22-203ENST00000617833 660 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC131159.1-201ENST00000621854 213 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC099506.2-201ENST00000623074 221 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC073308.1-201ENST00000623696 305 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
SIPA1Q96FS4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SIPA1Q96FS4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 Y_RNA.46-201ENST00000362695 102 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 RNA5SP229-201ENST00000410809 99 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 RNA5SP107-201ENST00000411358 122 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC099548.1-201ENST00000421443 426 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC011233.1-201ENST00000422812 283 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC007919.1-201ENST00000429380 217 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 RNU6-390P-201ENST00000516259 103 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 DEFB108A-201ENST00000530110 222 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC093012.1-202ENST00000549403 582 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC034105.3-201ENST00000565294 442 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC068135.2-201ENST00000569293 1028 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 uc_338.25-201ENST00000613756 156 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AL355493.4-201ENST00000618530 292 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 AC006927.3-201ENST00000638789 384 ntBASIC3.19□□□□□ -1.9
SIPA1Q96FS4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIPA1Q96FS4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.18□□□□□ -1.9
SIPA1Q96FS4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SIPA1Q96FS4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIPA1Q96FS4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.18□□□□□ -1.9
SIPA1Q96FS4 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SIPA1Q96FS4 RNA5SP139-201ENST00000364340 117 ntBASIC3.18□□□□□ -1.9
SIPA1Q96FS4 RNU6-7-201ENST00000364784 107 ntBASIC3.18□□□□□ -1.9
SIPA1Q96FS4 RNU6-8-201ENST00000365467 107 ntBASIC3.18□□□□□ -1.9
SIPA1Q96FS4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.18□□□□□ -1.9
SIPA1Q96FS4 SNORA44-201ENST00000384584 132 ntBASIC3.18□□□□□ -1.9
SIPA1Q96FS4 RNU6-278P-201ENST00000390945 109 ntBASIC3.18□□□□□ -1.9
SIPA1Q96FS4 AL359634.1-202ENST00000404721 284 ntBASIC3.18□□□□□ -1.9
SIPA1Q96FS4 RPL17P12-201ENST00000413391 526 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms