Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC018754.1-201ENST00000607486 925 ntBASIC1.23□□□□□ -2.21
TTC28Q96AY4 AL356118.1-201ENST00000635272 1078 ntBASIC1.23□□□□□ -2.21
TTC28Q96AY4 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
TTC28Q96AY4 Y_RNA.136-201ENST00000363444 102 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 RNA5SP189-201ENST00000364920 115 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC093716.1-201ENST00000435923 377 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 CFTRP1-201ENST00000456646 183 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC092754.2-201ENST00000463506 460 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 RNU4-60P-201ENST00000517239 135 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 MTND4LP24-201ENST00000572277 291 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC123912.5-201ENST00000605470 343 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 RNA5SP108-201ENST00000605921 117 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC016877.3-201ENST00000606778 504 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 XIST_intron.1-201ENST00000619444 68 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AP003072.4-201ENST00000624580 310 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TTC28Q96AY4 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
TTC28Q96AY4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 SNRPEP3-201ENST00000338402 276 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 RNU6-670P-201ENST00000364312 104 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC004941.2-201ENST00000427009 228 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 RPL21P131-201ENST00000497298 483 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 AP001180.3-201ENST00000582221 145 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 GAS5-AS1-201ENST00000602767 694 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AC211469.2-201ENST00000605461 205 ntBASIC1.22□□□□□ -2.21
TTC28Q96AY4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.22□□□□□ -2.21
TTC28Q96AY4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC008850.1-201ENST00000427546 362 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 ARPC3P2-201ENST00000457786 533 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC146507.1-201ENST00000468335 354 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 ATG10-AS1-201ENST00000504846 648 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC103833.1-201ENST00000517442 172 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 VN1R107P-201ENST00000601784 209 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC084373.1-201ENST00000603311 235 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC004943.3-201ENST00000624116 600 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 Y_RNA.62-201ENST00000362840 99 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 MIR320B1-201ENST00000390209 79 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 Z85995.1-201ENST00000415547 335 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 ELOCP6-201ENST00000429066 328 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 ELOCP12-201ENST00000458706 328 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC090071.1-201ENST00000507713 644 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AP003117.1-201ENST00000602771 554 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.21□□□□□ -2.22
TTC28Q96AY4 AP000553.5-201ENST00000641933 54 ntBASIC1.21□□□□□ -2.22
TTC28Q96AY4 AL589743.1-201ENST00000551932 2712 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 DYNLT3P1-201ENST00000378574 347 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 UBE2V2P1-201ENST00000434717 398 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC078918.1-201ENST00000498515 228 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.2□□□□□ -2.22
TTC28Q96AY4 AK3P2-201ENST00000507976 429 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC010735.1-201ENST00000567305 1026 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC245128.3-201ENST00000594721 748 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AL590099.1-201ENST00000615276 138 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
TTC28Q96AY4 DEFB108F-201ENST00000344638 222 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 SNORA51.10-201ENST00000384418 136 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 MTND4P13-201ENST00000402078 1023 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 SSXP10-201ENST00000402595 565 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 MRPS36P1-201ENST00000421291 307 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC241520.1-201ENST00000422654 1099 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC016691.1-201ENST00000441321 413 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 ARL5AP2-201ENST00000444698 533 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.2□□□□□ -2.22
TTC28Q96AY4 AL049779.4-201ENST00000604500 156 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 MIR2909-201ENST00000617113 69 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC138649.5-201ENST00000637456 137 ntBASIC1.2□□□□□ -2.22
TTC28Q96AY4 AC008669.1-201ENST00000565823 2178 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 MIR330-201ENST00000362196 94 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 MIR1197-201ENST00000408818 88 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 RNA5SP489-201ENST00000410986 109 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC005912.1-201ENST00000495392 255 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC008427.1-201ENST00000503102 655 ntBASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.19□□□□□ -2.22
TTC28Q96AY4 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms