Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
HPS1Q92902 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HPS1Q92902 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 RNA5SP52-201ENST00000362448 134 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU6-384P-201ENST00000364900 104 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU4-17P-201ENST00000365598 141 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU6-741P-201ENST00000383889 107 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU6-20P-201ENST00000384106 107 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU6-339P-201ENST00000384310 107 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNA5SP213-201ENST00000391031 106 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU1-139P-201ENST00000391307 165 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 SNORA77.2-201ENST00000408571 112 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNA5SP296-201ENST00000410523 111 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS1Q92902 PPP1R11P2-201ENST00000423543 382 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS1Q92902 PNKDP1-201ENST00000435914 430 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS1Q92902 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS1Q92902 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.31□□□□□ -1.56
HPS1Q92902 RANP2-201ENST00000456833 229 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS1Q92902 RN7SKP179-201ENST00000516126 217 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 RNU6-567P-201ENST00000516746 107 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS1Q92902 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS1Q92902 AC090616.3-201ENST00000582184 217 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 MIR4701-201ENST00000583094 63 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.31□□□□□ -1.56
HPS1Q92902 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.31□□□□□ -1.56
HPS1Q92902 AL355812.1-201ENST00000603215 216 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 AC024940.4-201ENST00000605507 246 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 AC005046.1-201ENST00000608515 625 ntBASIC5.31□□□□□ -1.56
HPS1Q92902 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS1Q92902 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
HPS1Q92902 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.31□□□□□ -1.56
HPS1Q92902 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HPS1Q92902 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.31□□□□□ -1.56
HPS1Q92902 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HPS1Q92902 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS1Q92902 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HPS1Q92902 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS1Q92902 RNU6-376P-201ENST00000384731 106 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AL592148.1-201ENST00000413568 445 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS1Q92902 AC090774.1-201ENST00000435925 246 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 RNU6-168P-201ENST00000516189 101 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 RNU6-589P-201ENST00000516485 107 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 RN7SKP49-201ENST00000516675 260 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 RN7SKP272-201ENST00000516988 232 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 RNU6-1315P-201ENST00000517187 99 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AC133555.2-201ENST00000550213 292 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS1Q92902 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS1Q92902 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.3□□□□□ -1.56
HPS1Q92902 MIR5582-201ENST00000579697 68 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 MIR4431-201ENST00000579990 94 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 MIR4472-2-201ENST00000582069 67 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AC010928.2-201ENST00000588017 287 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 NF1P5-201ENST00000588287 448 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.3□□□□□ -1.56
HPS1Q92902 AC092266.1-201ENST00000610958 165 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 AL450472.3-201ENST00000615578 367 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 Clostridiales-1.2-201ENST00000636724 160 ntBASIC5.3□□□□□ -1.56
HPS1Q92902 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.3□□□□□ -1.56
HPS1Q92902 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HPS1Q92902 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HPS1Q92902 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
HPS1Q92902 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HPS1Q92902 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
HPS1Q92902 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HPS1Q92902 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.29□□□□□ -1.56
HPS1Q92902 RNA5SP346-201ENST00000363541 121 ntBASIC5.29□□□□□ -1.56
HPS1Q92902 RNU6-395P-201ENST00000365662 106 ntBASIC5.29□□□□□ -1.56
HPS1Q92902 SNORA22-201ENST00000383907 134 ntBASIC5.29□□□□□ -1.56
HPS1Q92902 MIR135A2-201ENST00000384854 100 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms