Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC073343.1-201ENST00000328239 651 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC4Q92889 RNU6-552P-201ENST00000362869 119 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 U3.12-201ENST00000364498 214 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC4Q92889 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 RNU6-432P-201ENST00000384196 109 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 snosnR66.1-201ENST00000391095 99 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AL122016.1-201ENST00000403365 367 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 RNU2-29P-201ENST00000410423 189 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 MTND3P8-201ENST00000412909 339 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AL353678.1-201ENST00000422735 741 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 IFNA20P-201ENST00000436840 528 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 MRPL50P4-201ENST00000446432 475 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 RPS29P15-201ENST00000458329 171 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 RN7SL303P-201ENST00000469773 251 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 AC026427.2-201ENST00000506228 536 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AC091885.1-201ENST00000506658 268 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AC026726.1-201ENST00000512859 601 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 AC022690.1-201ENST00000526681 550 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 AC093027.1-201ENST00000546698 429 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AC025627.2-201ENST00000576220 160 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.52□□□□□ -1.69
ERCC4Q92889 uc_338.5-201ENST00000611839 155 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ERCC4Q92889 ATP8A2P2-201ENST00000437678 1568 ntBASIC4.52□□□□□ -1.69
ERCC4Q92889 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.52□□□□□ -1.69
ERCC4Q92889 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ERCC4Q92889 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 TAB3P1-202ENST00000452645 1634 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC006504.1-201ENST00000562493 3666 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 MIR423-201ENST00000362201 94 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 RNU6-960P-201ENST00000364056 120 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 SNORA62.1-201ENST00000364287 154 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 RNU6-522P-201ENST00000364497 107 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 SNORA70.2-201ENST00000364506 135 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 AC068538.1-201ENST00000376856 336 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 RNU6-641P-201ENST00000384006 107 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 Y_RNA.460-201ENST00000384255 102 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 Z98941.1-201ENST00000407764 100 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC009161.1-201ENST00000417306 376 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.51□□□□□ -1.69
ERCC4Q92889 AC018630.2-202ENST00000422992 927 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.51□□□□□ -1.69
ERCC4Q92889 ATP5HP2-201ENST00000433885 485 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 TBCAP1-201ENST00000436520 327 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
ERCC4Q92889 AL118520.1-201ENST00000450770 291 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 HMGN2P7-201ENST00000456186 273 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 RNU7-180P-201ENST00000459240 63 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 RNU7-170P-201ENST00000459303 61 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC007537.2-201ENST00000472093 511 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.51□□□□□ -1.69
ERCC4Q92889 RPL29P14-201ENST00000495837 428 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.51□□□□□ -1.69
ERCC4Q92889 SNORA19.2-201ENST00000516013 114 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.51□□□□□ -1.69
ERCC4Q92889 HPRT1P3-201ENST00000539521 576 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.51□□□□□ -1.69
ERCC4Q92889 AC136624.4-201ENST00000573044 370 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 MIR4703-201ENST00000577728 79 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AL031176.1-201ENST00000604554 466 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC012443.1-201ENST00000605605 231 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 uc_338.11-201ENST00000619132 160 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 MIR6130-201ENST00000619419 109 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 AC011155.2-201ENST00000623202 216 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 TPTEP1-208ENST00000636884 213 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.51□□□□□ -1.69
ERCC4Q92889 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 LARP1BP1-201ENST00000506036 1359 ntBASIC4.51□□□□□ -1.69
ERCC4Q92889 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ERCC4Q92889 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.5□□□□□ -1.69
ERCC4Q92889 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
ERCC4Q92889 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERCC4Q92889 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
ERCC4Q92889 RNU6-1284P-201ENST00000363701 100 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 RNA5SP366-201ENST00000365454 123 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 RNU6-1029P-201ENST00000384109 107 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.5□□□□□ -1.69
ERCC4Q92889 Y_RNA.615-201ENST00000410769 117 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC4Q92889 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.5□□□□□ -1.69
ERCC4Q92889 AC091390.1-201ENST00000433904 331 ntBASIC4.5□□□□□ -1.69
ERCC4Q92889 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.5□□□□□ -1.69
ERCC4Q92889 AC007677.1-201ENST00000445757 515 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms