Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 UBE2V2P2-201ENST00000587677 504 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC098848.2-201ENST00000588023 330 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 MIR7975-201ENST00000619350 68 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 AC007656.2-201ENST00000624902 4547 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 ZNF680P1-201ENST00000436625 1469 ntBASIC4.67□□□□□ -1.66
RTF1Q92541 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.67□□□□□ -1.66
RTF1Q92541 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RTF1Q92541 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.67□□□□□ -1.66
RTF1Q92541 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
RTF1Q92541 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTF1Q92541 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
RTF1Q92541 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
RTF1Q92541 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.66□□□□□ -1.66
RTF1Q92541 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.66□□□□□ -1.66
RTF1Q92541 RNU6-451P-201ENST00000362921 107 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 RNA5SP387-201ENST00000364226 106 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 RNU6-1158P-201ENST00000391167 107 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC068050.1-201ENST00000394891 380 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC005517.2-201ENST00000424673 553 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 MTND4P28-201ENST00000426217 387 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.66□□□□□ -1.66
RTF1Q92541 RPL23AP30-201ENST00000432419 501 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AL606489.2-201ENST00000433886 234 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC016691.1-201ENST00000441321 413 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.66□□□□□ -1.66
RTF1Q92541 PPIAP3-201ENST00000450588 505 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 RBMY2UP-201ENST00000453474 324 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 RNU7-59P-201ENST00000459101 61 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 HMGB1P25-201ENST00000468402 607 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
RTF1Q92541 AC020893.1-201ENST00000502452 580 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 RNU6-507P-201ENST00000516045 100 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 SCARNA24.1-201ENST00000516465 137 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 RN7SKP116-201ENST00000516902 319 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 OR8L1P-201ENST00000534005 955 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.66□□□□□ -1.66
RTF1Q92541 AC034105.3-201ENST00000565294 442 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC055876.1-202ENST00000567053 138 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AL669831.4-202ENST00000590817 238 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 KLKP1-201ENST00000595979 403 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 Z84480.1-201ENST00000605131 311 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC009994.1-201ENST00000606889 253 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.66□□□□□ -1.66
RTF1Q92541 U4.6-201ENST00000621618 127 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 AC138649.5-201ENST00000637456 137 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RTF1Q92541 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
RTF1Q92541 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.66□□□□□ -1.66
RTF1Q92541 PRO1804-201ENST00000623780 2050 ntBASIC4.66□□□□□ -1.66
RTF1Q92541 MTCO1P24-201ENST00000515438 1558 ntBASIC4.65□□□□□ -1.66
RTF1Q92541 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
RTF1Q92541 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RTF1Q92541 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RTF1Q92541 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RTF1Q92541 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RTF1Q92541 RNU6-989P-201ENST00000362756 107 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 RNA5SP322-201ENST00000363617 119 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 U3.11-201ENST00000364476 212 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 RNU6-1078P-201ENST00000364522 103 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 RNU6-74P-201ENST00000384235 107 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 Y_RNA.493-201ENST00000384422 102 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 MIR490-201ENST00000384865 128 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 RNU6-278P-201ENST00000390945 109 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.65□□□□□ -1.67
RTF1Q92541 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 ATP5JP1-201ENST00000431631 322 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.65□□□□□ -1.67
RTF1Q92541 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.65□□□□□ -1.67
RTF1Q92541 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 DDX3P2-201ENST00000446138 111 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.65□□□□□ -1.67
RTF1Q92541 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.65□□□□□ -1.67
RTF1Q92541 AL049714.1-201ENST00000466686 347 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 AC091951.2-201ENST00000500762 203 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 RNU6-875P-201ENST00000516488 106 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.65□□□□□ -1.67
RTF1Q92541 AP000857.1-201ENST00000532151 543 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.65□□□□□ -1.67
RTF1Q92541 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.65□□□□□ -1.67
RTF1Q92541 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.65□□□□□ -1.67
RTF1Q92541 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.65□□□□□ -1.67
RTF1Q92541 GLUD1P4-201ENST00000590914 418 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AC115621.1-201ENST00000604653 858 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AL035413.2-201ENST00000604801 525 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AP003117.2-201ENST00000606010 545 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 AC105429.2-201ENST00000610567 517 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 Y_RNA.804-201ENST00000615262 101 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.65□□□□□ -1.67
RTF1Q92541 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RTF1Q92541 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.65□□□□□ -1.67
RTF1Q92541 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RTF1Q92541 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms