Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 MTND3P17-201ENST00000416968 344 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 MTCO1P39-201ENST00000426148 480 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 ATP5JP1-201ENST00000431631 322 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC090774.1-201ENST00000435925 246 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC093156.1-201ENST00000440382 670 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 Z99127.3-201ENST00000448158 395 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC135721.1-201ENST00000497954 479 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC105252.1-201ENST00000503089 286 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC104619.4-201ENST00000510773 249 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 DEFB108D-201ENST00000527787 222 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 DEFB108A-201ENST00000530110 222 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC073648.5-201ENST00000603502 305 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC098614.4-201ENST00000607601 462 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC006023.2-201ENST00000609916 167 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC245517.5-201ENST00000611529 162 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AL450472.3-201ENST00000615578 367 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC099842.1-201ENST00000619919 596 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC244100.1-202ENST00000621554 382 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC243312.2-201ENST00000623340 601 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC095031.1-201ENST00000623685 672 ntBASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SLC44A1Q8WWI5 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-432P-201ENST00000384196 109 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AL109755.1-201ENST00000401791 649 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AP000567.1-201ENST00000406413 156 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC019097.1-201ENST00000424783 735 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 TRIAP1P1-201ENST00000427062 225 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 YME1L1P1-201ENST00000429435 297 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC004866.2-201ENST00000438285 481 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 HMGB1P12-201ENST00000438594 598 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AL359385.1-201ENST00000456509 365 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 RN7SKP18-201ENST00000516005 275 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 SYF2P1-201ENST00000550658 413 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 BNIP3P22-201ENST00000593399 556 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC068790.6-201ENST00000602558 258 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC008739.3-201ENST00000603262 127 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC245014.2-201ENST00000603689 287 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AL022099.1-201ENST00000604551 712 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC246785.4-201ENST00000605374 287 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC136475.10-201ENST00000620253 385 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AL356321.1-201ENST00000621360 228 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC019226.1-201ENST00000625666 515 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC110994.2-201ENST00000635481 492 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 AC009093.8-201ENST00000641769 292 ntBASIC3.34□□□□□ -1.87
SLC44A1Q8WWI5 DDX10P1-201ENST00000448545 1933 ntBASIC3.34□□□□□ -1.88
SLC44A1Q8WWI5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SLC44A1Q8WWI5 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SLC44A1Q8WWI5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 AC009812.4-201ENST00000569134 1805 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNU5E-1-201ENST00000362477 120 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNU1-70P-201ENST00000362618 164 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNA5SP119-201ENST00000362715 117 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNU5E-8P-201ENST00000363502 116 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNY4P16-201ENST00000364768 94 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNU6-259P-201ENST00000383999 107 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 SNORD17-201ENST00000390930 237 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 AL136372.1-201ENST00000403060 228 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNA5SP129-201ENST00000410276 118 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 RNU2-62P-201ENST00000410868 191 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 PIGFP2-201ENST00000421400 651 ntBASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC44A1Q8WWI5 PPP1R11P2-201ENST00000423543 382 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms