Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC007256.1-201ENST00000392253 2765 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 Y_RNA.192-201ENST00000363977 102 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 RNU6-1226P-201ENST00000384317 107 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 MIR153-1-201ENST00000384914 90 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 RNU6-1242P-201ENST00000391052 103 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 U3.37-201ENST00000408528 213 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 MTCO2P8-201ENST00000412213 658 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC005005.2-201ENST00000420779 380 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC092427.1-202ENST00000430569 476 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 Z73417.1-201ENST00000447373 778 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 RPL23AP20-201ENST00000447965 421 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC117522.2-201ENST00000510049 657 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 RN7SKP234-201ENST00000517173 224 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 HMGN2P28-201ENST00000606102 262 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC106052.1-201ENST00000608029 497 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC007349.4-201ENST00000608114 532 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC243773.3-201ENST00000613270 256 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC009318.4-201ENST00000620496 486 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC090772.4-201ENST00000623599 362 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 AC106754.1-201ENST00000562632 1513 ntBASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SHROOM3Q8TF72 SNRPEP3-201ENST00000338402 276 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RNU6-263P-201ENST00000363811 107 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 SNORD82-201ENST00000365530 70 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 MIR217-201ENST00000384817 110 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RPL31P54-201ENST00000429803 370 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 HMGN3P1-201ENST00000453847 193 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC092155.2-201ENST00000454675 477 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 MTCO3P2-201ENST00000457365 171 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC087879.1-201ENST00000474343 374 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 ZNF705CP-201ENST00000530515 889 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC093519.1-201ENST00000566109 298 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 MTND1P8-201ENST00000571424 950 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 BBIP1P1-201ENST00000602999 279 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AL035411.2-201ENST00000604022 421 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC009220.3-201ENST00000604318 586 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AL022099.1-201ENST00000604551 712 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC131902.3-201ENST00000611767 581 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC025588.4-201ENST00000615802 908 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC012321.1-201ENST00000561622 1588 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 SNORA26.9-201ENST00000391322 122 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 MTATP6P20-201ENST00000414147 562 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC092634.6-201ENST00000418558 192 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 MTCO3P30-201ENST00000426425 670 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RPL23AP58-201ENST00000440453 469 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC007327.1-201ENST00000447461 264 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RPL21P134-201ENST00000453468 483 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 SNORD13-201ENST00000459299 104 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC097493.1-201ENST00000463958 372 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AC016065.2-201ENST00000514530 444 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RNU6-488P-201ENST00000515918 99 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 RNU2-58P-201ENST00000516403 183 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AP001372.4-201ENST00000524889 472 ntBASIC2.1□□□□□ -2.07
SHROOM3Q8TF72 AP000790.1-201ENST00000528891 737 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms