Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 UBE2V1P4-201ENST00000425374 344 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC016712.1-201ENST00000431088 378 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AL353752.1-201ENST00000454946 260 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AL445433.1-201ENST00000457507 257 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC007686.1-201ENST00000488511 463 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 SNORA31.3-201ENST00000516029 96 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 RNU6-513P-201ENST00000516104 104 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC090151.1-201ENST00000520784 730 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 ERHP1-201ENST00000523006 310 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AP001880.2-201ENST00000538233 448 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC005357.1-201ENST00000588399 301 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 ELOCP5-201ENST00000604924 333 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 HMGB1P24-202ENST00000615653 685 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 AC087385.3-201ENST00000620477 187 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 MIR6810-201ENST00000622701 70 ntBASIC4.4□□□□□ -1.71
NUP43Q8NFH3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.4□□□□□ -1.71
NUP43Q8NFH3 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC090971.4-201ENST00000560291 1800 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RNU6-371P-201ENST00000364283 108 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.257-201ENST00000364596 102 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.396-201ENST00000383949 103 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RNU6-817P-201ENST00000391083 104 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 MIR1250-201ENST00000408098 113 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RNU4-78P-201ENST00000410940 126 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AL158071.1-201ENST00000430315 461 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC099799.1-201ENST00000439809 192 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 FTH1P25-201ENST00000447665 469 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 PCNPP5-201ENST00000452246 481 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RNU7-138P-201ENST00000459479 64 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC006463.2-201ENST00000473326 348 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RPS27AP13-201ENST00000498403 237 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 SCARNA22-201ENST00000503991 125 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RN7SKP258-201ENST00000517151 304 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RN7SKP234-201ENST00000517173 224 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC022790.1-201ENST00000522872 204 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC022882.1-201ENST00000532142 501 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 SUB1P3-201ENST00000564581 315 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC067852.4-201ENST00000590314 478 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AL109918.3-201ENST00000603072 338 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AL391358.1-201ENST00000605342 190 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AL021879.1-201ENST00000611756 288 ntBASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NUP43Q8NFH3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 ASNSP1-201ENST00000518311 1939 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MAPK10-303ENST00000641324 3959 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.39-201ENST00000362620 98 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.126-201ENST00000363382 111 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 Y_RNA.380-201ENST00000365663 111 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 MIR517A-201ENST00000385001 87 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RNA5SP113-201ENST00000410486 84 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RPS27AP12-201ENST00000429552 465 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AL591212.2-201ENST00000433923 257 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 RPL23AP50-201ENST00000434149 455 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AC011816.1-201ENST00000441346 546 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.38□□□□□ -1.71
NUP43Q8NFH3 H2AFZP5-201ENST00000446960 382 ntBASIC4.38□□□□□ -1.71
NUP43Q8NFH3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms