Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 FAM60DP-201ENST00000524174 632 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AP003072.2-201ENST00000527756 676 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC007458.1-201ENST00000542812 373 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC093012.1-202ENST00000549403 582 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AL021997.1-201ENST00000605757 193 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 MIR7975-201ENST00000619350 68 ntBASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.31□□□□□ -1.88
BEST3Q8N1M1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC066616.2-201ENST00000559334 1481 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 HSPE1P11-201ENST00000339579 310 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 Y_RNA.6-201ENST00000362350 114 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RNU5A-1-201ENST00000362698 116 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RNU6-181P-201ENST00000363225 107 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RNU6-1103P-201ENST00000384150 107 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 SNORA36C-201ENST00000384289 132 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 MIR184-201ENST00000384962 84 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RNU6-648P-201ENST00000410190 107 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 BX842559.1-201ENST00000419615 532 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC008850.1-201ENST00000427546 362 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AP000907.1-201ENST00000428428 510 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 MTND3P21-201ENST00000433774 331 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RPS29P31-201ENST00000446147 164 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 SRRM1P2-201ENST00000464531 1192 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC010631.1-201ENST00000474150 156 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 HSPE1P6-201ENST00000479457 291 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC092451.1-201ENST00000480211 153 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RPL9P6-201ENST00000492764 598 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC023194.1-201ENST00000493084 308 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 GMPSP1-201ENST00000514075 579 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RNU6-445P-201ENST00000516949 107 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 MIR3921-201ENST00000577308 85 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC105224.1-201ENST00000587055 421 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 MIR7851-201ENST00000610611 160 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 LRRC77P-213ENST00000637727 880 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 SDAD1P2-201ENST00000441308 2028 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 CR848007.1-201ENST00000442354 1699 ntBASIC3.3□□□□□ -1.88
BEST3Q8N1M1 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
BEST3Q8N1M1 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC010733.2-201ENST00000589496 5702 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RNU6-50P-201ENST00000362356 103 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 Y_RNA.516-201ENST00000384541 124 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RNVU1-14-201ENST00000384770 164 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AL391417.1-201ENST00000404100 426 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AL359634.1-202ENST00000404721 284 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC073464.1-201ENST00000429823 534 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 MTCO2P11-201ENST00000431069 680 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC140076.1-201ENST00000449897 361 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RPL23AP14-201ENST00000468281 468 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 AC007182.2-201ENST00000489251 402 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RNU6-390P-201ENST00000516259 103 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RNU6-506P-201ENST00000516553 94 ntBASIC3.29□□□□□ -1.88
BEST3Q8N1M1 RNU7-51P-201ENST00000516560 62 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms