Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 RNU6-428P-201ENST00000362942 107 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SNORD14B-201ENST00000364533 90 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 RNU6-1289P-201ENST00000384431 106 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SNORD20-201ENST00000384550 80 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 Y_RNA.568-201ENST00000384742 113 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 Y_RNA.580-201ENST00000391004 95 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AL513331.1-201ENST00000411908 397 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 TOMM20P4-201ENST00000427861 435 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AL445665.1-202ENST00000452436 324 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 NXT1P1-201ENST00000458481 316 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SNORD125-201ENST00000459538 96 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AP001025.1-201ENST00000486139 332 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC091959.1-201ENST00000495857 238 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC084851.1-201ENST00000529105 249 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC005476.1-201ENST00000554427 397 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 MIR4311-201ENST00000580794 100 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC005046.1-201ENST00000608515 625 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AL360181.4-201ENST00000621752 134 ntBASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC116Q8IYX3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 SDAD1P2-201ENST00000441308 2028 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 RNU5A-1-201ENST00000362698 116 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 Y_RNA.272-201ENST00000364696 102 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 HSPA8P15-201ENST00000401676 786 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AL009179.1-201ENST00000406085 265 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 RPS3P2-201ENST00000421346 701 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AL162725.1-201ENST00000435405 301 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 snoU13.30-201ENST00000458951 104 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 RNU6-615P-201ENST00000516065 106 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 RNU7-110P-201ENST00000516891 62 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 SNORA43.3-201ENST00000517240 103 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AC073349.3-201ENST00000617616 186 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AC090617.7-201ENST00000623952 126 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AC093535.2-201ENST00000624769 2326 ntBASIC5.28□□□□□ -1.56
CCDC116Q8IYX3 AL138820.1-201ENST00000617901 5305 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AL022722.2-201ENST00000402519 180 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 DUTP5-201ENST00000406790 469 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 RNU5A-5P-201ENST00000411054 116 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AL354868.1-201ENST00000417077 482 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC138761.5-201ENST00000433967 325 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC016700.2-201ENST00000446011 156 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC007395.1-201ENST00000451333 677 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC122688.1-201ENST00000541494 223 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC116Q8IYX3 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms