Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU4-72P-201ENST00000410754 173 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC093156.1-201ENST00000440382 670 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 TPT1P14-201ENST00000448018 505 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 RPS27AP1-201ENST00000475545 471 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 RPL30P6-201ENST00000475925 342 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 RPL31P60-201ENST00000478450 367 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 HSPE1P6-201ENST00000479457 291 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC010486.2-201ENST00000505572 483 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC111000.2-201ENST00000507775 550 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC005178.1-201ENST00000508392 440 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 HIGD1AP13-201ENST00000509878 289 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 MTND1P22-201ENST00000510572 951 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 SCARNA13-201ENST00000516672 275 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 RN7SKP282-201ENST00000516824 299 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 PCMTD1P2-201ENST00000565017 355 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC010653.1-201ENST00000571108 881 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 MIR4307-201ENST00000582802 84 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 MTCYBP22-201ENST00000603788 447 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC068313.1-201ENST00000604028 1008 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AL033523.1-201ENST00000605153 153 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC008147.4-201ENST00000617570 1204 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AL603758.1-201ENST00000618654 241 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC006386.2-201ENST00000624491 75 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC012005.1-201ENST00000624575 75 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 MIR4275-201ENST00000636486 87 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC006927.3-201ENST00000638789 384 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC012321.1-201ENST00000561622 1588 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 AC090740.1-201ENST00000623193 2262 ntBASIC2.65□□□□□ -1.99
C9orf40Q8IXQ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 DDX10P1-201ENST00000448545 1933 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RNU1-35P-201ENST00000362782 153 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 Y_RNA.97-201ENST00000363094 102 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 Y_RNA.169-201ENST00000363745 96 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-432P-201ENST00000384196 109 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 Y_RNA.560-201ENST00000384689 102 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-754P-201ENST00000391166 107 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AF228730.1-201ENST00000397972 663 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL049545.1-201ENST00000401856 572 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC109780.2-201ENST00000413467 845 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RPS27AP14-201ENST00000422868 454 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL365203.2-201ENST00000423444 196 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC233728.2-201ENST00000425348 757 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 CETN4P-201ENST00000432407 469 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RPL35AP22-201ENST00000436855 335 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 HIGD1AP11-201ENST00000438361 280 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 TRIM60P18-201ENST00000441518 828 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RPL36AP33-201ENST00000450395 310 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL049714.1-201ENST00000466686 347 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC135721.1-201ENST00000497954 479 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC097462.2-201ENST00000504623 481 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-759P-201ENST00000516740 103 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC022690.1-201ENST00000526681 550 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 CYCSP39-201ENST00000565821 309 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC106782.4-201ENST00000568264 210 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL109653.1-201ENST00000603091 248 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AP000254.1-201ENST00000609934 520 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC122133.1-201ENST00000613964 233 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AC112204.3-201ENST00000623822 332 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL136164.4-201ENST00000625013 2135 ntBASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
C9orf40Q8IXQ3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AC093908.1-201ENST00000623125 8092 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-553P-201ENST00000364047 96 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 RNU6-501P-201ENST00000364072 100 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 MIR512-1-201ENST00000384913 84 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 MIR1290-201ENST00000408735 78 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 VPS26BP1-201ENST00000417155 755 ntBASIC2.63□□□□□ -1.99
C9orf40Q8IXQ3 USP9YP26-201ENST00000421008 661 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms