Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC009487.2-201ENST00000420969 6821 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTR9Q6PD62 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AL672167.1-206ENST00000356293 943 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 RNU6-660P-201ENST00000364566 109 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 SNORA14A-201ENST00000364773 135 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 MIR512-1-201ENST00000384913 84 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 MIR320C1-201ENST00000408566 88 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 MIR1289-1-201ENST00000408836 144 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 RN7SKP266-201ENST00000410232 287 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 RNA5SP492-201ENST00000411330 114 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AL096701.2-201ENST00000416920 238 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AL365203.2-201ENST00000423444 196 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC234781.2-201ENST00000426370 994 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 UBBP3-201ENST00000445497 241 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 Z96811.1-201ENST00000445880 108 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC108938.1-201ENST00000451204 136 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 RPL30P9-201ENST00000465586 330 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC104563.1-201ENST00000476147 376 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC072039.1-201ENST00000477611 581 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 MTND1P22-201ENST00000510572 951 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC034159.1-201ENST00000513885 583 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 RNU6-759P-201ENST00000516740 103 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 RNU6-232P-201ENST00000517144 64 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CTR9Q6PD62 CR383656.7-201ENST00000548164 174 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC125611.2-201ENST00000551907 647 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AL357094.1-201ENST00000603845 844 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 DUXAP11-201ENST00000603858 526 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC008962.1-201ENST00000605729 304 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC090115.4-201ENST00000609970 188 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC022079.1-201ENST00000621546 602 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 MIR6852-201ENST00000621699 66 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC092192.1-201ENST00000633154 1018 ntBASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CTR9Q6PD62 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CTR9Q6PD62 AC006378.2-201ENST00000623178 2476 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTR9Q6PD62 AL161781.1-201ENST00000354277 403 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 RNU6-553P-201ENST00000364047 96 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 SNORD56.5-201ENST00000364281 72 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 RNU1-109P-201ENST00000383960 147 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 HMGN2P35-201ENST00000412164 270 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 RPL23AP39-201ENST00000415533 405 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 BX119904.4-201ENST00000424402 301 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 MTATP6P4-201ENST00000427725 675 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 RPS29P6-201ENST00000438196 145 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AP000542.1-201ENST00000448473 371 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 PAXBP1P1-201ENST00000449315 447 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 SNORA59A-201ENST00000459326 152 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 BZW1P2-201ENST00000473537 826 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AP004217.1-201ENST00000480579 346 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AC005178.1-201ENST00000508392 440 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AC090136.1-201ENST00000520009 240 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 AC090888.1-201ENST00000561335 1141 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 AC012182.1-201ENST00000570133 895 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.32□□□□□ -1.88
CTR9Q6PD62 AP003122.6-201ENST00000623831 495 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 MTND4P16-201ENST00000466108 1367 ntBASIC3.32□□□□□ -1.88
CTR9Q6PD62 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CTR9Q6PD62 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CTR9Q6PD62 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTR9Q6PD62 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL360182.1-201ENST00000397433 468 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL138827.1-201ENST00000402666 306 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 MTCO3P12-201ENST00000416718 547 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 MTND2P18-201ENST00000419962 1030 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.31□□□□□ -1.88
CTR9Q6PD62 OR6K5P-201ENST00000447050 945 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 snoU13.8-201ENST00000458890 104 ntBASIC3.31□□□□□ -1.88
CTR9Q6PD62 RPL30P6-201ENST00000475925 342 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms