Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
ZNF544Q6NX49 RPL9P7-201ENST00000330965 580 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL672167.1-206ENST00000356293 943 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 RNU4-21P-201ENST00000362802 126 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 U3.26-201ENST00000391236 204 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL139095.1-201ENST00000404326 391 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 RNU2-15P-201ENST00000410692 191 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 TPMTP3-201ENST00000411928 735 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL365338.1-201ENST00000422282 858 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC098826.1-201ENST00000433943 471 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 SNRPEP4-201ENST00000435815 279 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 LARP1BP3-201ENST00000437229 869 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL512286.1-201ENST00000439244 400 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 SDCBPP1-201ENST00000440192 890 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC016696.1-201ENST00000446949 318 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC106872.3-201ENST00000495104 446 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC008885.1-201ENST00000514930 301 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 SNORA31.1-201ENST00000515993 133 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 SNORA31.5-201ENST00000516190 133 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 PCMTD1P2-201ENST00000565017 355 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC012182.1-201ENST00000570133 895 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL451007.1-201ENST00000595491 289 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AF131215.7-201ENST00000602443 707 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AL590229.1-201ENST00000603497 542 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 BCRP9-201ENST00000605312 388 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC006329.2-201ENST00000611491 394 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AP003122.6-201ENST00000623831 495 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC091925.2-201ENST00000625059 256 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 AC092192.1-201ENST00000633154 1018 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.67□□□□□ -1.98
ZNF544Q6NX49 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.67□□□□□ -1.98
ZNF544Q6NX49 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 Y_RNA.77-201ENST00000362962 107 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 RNU6-359P-201ENST00000365466 108 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 RN7SKP220-201ENST00000410611 288 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 NPM1P11-201ENST00000417106 855 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 RPL35AP12-201ENST00000425362 338 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 MED14P1-201ENST00000430517 648 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 RPL31P3-201ENST00000458430 332 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 SCARNA13-201ENST00000516672 275 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 FAM60DP-201ENST00000524174 632 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AP004247.1-201ENST00000531556 1289 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC125611.2-201ENST00000551907 647 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 SETP7-201ENST00000552169 453 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AL121603.1-201ENST00000553815 142 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 DNAJC8P1-201ENST00000554535 372 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AL022161.1-201ENST00000604390 213 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC010338.1-201ENST00000621823 717 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC091931.1-201ENST00000623488 728 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC040168.1-201ENST00000623594 991 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 SCARNA15.3-201ENST00000626315 122 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 SCARNA4.1-201ENST00000628597 123 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 ELL2P3-201ENST00000457883 1602 ntBASIC2.66□□□□□ -1.98
ZNF544Q6NX49 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.66□□□□□ -1.98
ZNF544Q6NX49 AL161781.1-201ENST00000354277 403 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNU6-28P-201ENST00000362378 107 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNA5SP258-201ENST00000362750 119 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 Y_RNA.97-201ENST00000363094 102 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 Y_RNA.111-201ENST00000363248 100 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNU6-501P-201ENST00000364072 100 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNU6-7-201ENST00000364784 107 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNU6-8-201ENST00000365467 107 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MIR592-201ENST00000384959 97 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNU6-837P-201ENST00000391056 108 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RPL7P8-201ENST00000411964 730 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 COTL1P1-201ENST00000422309 375 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 RPS27AP14-201ENST00000422868 454 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AL445669.1-201ENST00000426743 755 ntBASIC2.65□□□□□ -1.99
ZNF544Q6NX49 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms