Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 AC132942.1-201ENST00000486753 483 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 AC093591.1-201ENST00000491435 481 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 RPL21P16-201ENST00000495531 483 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 AL359273.1-201ENST00000510918 627 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 SERF1AP1-201ENST00000514575 187 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 RNU6-612P-201ENST00000516909 102 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 HMGB1P14-201ENST00000557424 591 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 AC136932.1-201ENST00000574771 208 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 AC010620.2-201ENST00000600135 313 ntBASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.79□□□□□ -1.48
PRPF38BQ5VTL8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AC005332.5-201ENST00000591222 2919 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 RNU6-384P-201ENST00000364900 104 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 Y_RNA.602-201ENST00000410535 92 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 RPL23AP22-201ENST00000437556 453 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 H3F3BP1-201ENST00000440551 403 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AL591623.2-201ENST00000449978 222 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 Y_RNA.706-201ENST00000516933 99 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AC008121.1-201ENST00000603244 268 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AL138820.1-201ENST00000617901 5305 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AL353748.2-201ENST00000622148 471 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 SMG1P6-201ENST00000532337 2930 ntBASIC5.78□□□□□ -1.48
PRPF38BQ5VTL8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.405-201ENST00000383979 100 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 RNU6-356P-201ENST00000384140 107 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.451-201ENST00000384200 100 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.524-201ENST00000384564 100 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 Y_RNA.561-201ENST00000384694 100 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SNORA12.2-201ENST00000391040 156 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AL009179.1-201ENST00000406085 265 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AL592148.1-201ENST00000413568 445 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 TMEM167AP1-201ENST00000423409 219 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 RPS12P10-201ENST00000427031 377 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AL589765.3-201ENST00000446084 462 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 RN7SL244P-201ENST00000493405 297 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 DUTP1-201ENST00000493631 470 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 RPS23P5-201ENST00000495419 428 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 RN7SKP67-201ENST00000515905 235 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SNORD116-26-201ENST00000516006 96 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SNORA25.14-201ENST00000516481 132 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AL161713.1-201ENST00000555538 145 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AL161798.1-201ENST00000604630 131 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AC073657.2-201ENST00000605661 303 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 OR4G2P-202ENST00000641004 1759 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 AL391684.1-202ENST00000641293 1636 ntBASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
PRPF38BQ5VTL8 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms