Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 MTCO3P24-201ENST00000572729 782 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 MIR3921-201ENST00000577308 85 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC068790.3-201ENST00000602988 553 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 MIR98-201ENST00000606724 119 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AL603758.1-201ENST00000618654 241 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 AC010733.2-201ENST00000589496 5702 ntBASIC4.3□□□□□ -1.72
LONRF3Q496Y0 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.3□□□□□ -1.72
LONRF3Q496Y0 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 Y_RNA.450-201ENST00000384198 113 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AL354719.1-201ENST00000406535 843 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MIR1290-201ENST00000408735 78 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 U3.42-201ENST00000408746 214 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 TIMM9P3-201ENST00000428659 274 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC073464.1-201ENST00000429823 534 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MTCO2P11-201ENST00000431069 680 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AL358232.1-201ENST00000448030 501 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 HSPE1P6-201ENST00000479457 291 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC092989.1-201ENST00000481235 277 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 RPL23AP41-201ENST00000484754 458 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC055855.1-201ENST00000489563 579 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC019235.1-201ENST00000503847 207 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC010587.1-201ENST00000505809 469 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC009646.1-201ENST00000510455 318 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 Vault.3-201ENST00000516676 95 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC022695.1-201ENST00000522089 237 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 IGHV3-76-201ENST00000522465 295 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 BNIP3P22-201ENST00000593399 556 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC024220.1-201ENST00000603675 484 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MIR4275-201ENST00000636486 87 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MIR3688-2-201ENST00000636963 87 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 AC110774.1-201ENST00000623567 2018 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 MAPK10-373ENST00000641983 6772 ntBASIC4.29□□□□□ -1.72
LONRF3Q496Y0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LONRF3Q496Y0 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 Y_RNA.1-201ENST00000352915 104 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RNU6-181P-201ENST00000363225 107 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RNU4-1-201ENST00000363925 141 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RNU6-282P-201ENST00000365357 103 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 SNORA1.3-201ENST00000384676 136 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 U8.11-201ENST00000384699 133 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 U8.12-201ENST00000384701 133 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RNU6-780P-201ENST00000391030 104 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RPS4XP3-201ENST00000398541 413 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 DPPA2P1-201ENST00000428060 556 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC002486.1-201ENST00000435098 391 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AL133547.1-201ENST00000448546 220 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC132479.1-201ENST00000449160 144 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 U8.18-201ENST00000459285 133 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RPL30P14-201ENST00000482744 348 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC007182.2-201ENST00000489251 402 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC135721.1-201ENST00000497954 479 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 FAM92A1P2-202ENST00000504766 877 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 ARL4AP2-201ENST00000507378 601 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 MIR2114-201ENST00000516645 80 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RNU6-445P-201ENST00000516949 107 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC068135.2-201ENST00000569293 1028 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 SNORA62.6-201ENST00000606322 83 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 AC022306.2-201ENST00000617563 647 ntBASIC4.28□□□□□ -1.72
LONRF3Q496Y0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LONRF3Q496Y0 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 ZNF285B-201ENST00000561698 1767 ntBASIC4.27□□□□□ -1.73
LONRF3Q496Y0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LONRF3Q496Y0 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 162.9 ms