Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.04□□□□□ -2.24
TFF3Q07654 AC105252.1-201ENST00000503089 286 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.04□□□□□ -2.24
TFF3Q07654 RNA5SP480-201ENST00000516840 109 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 RNU4-60P-201ENST00000517239 135 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AC022634.1-201ENST00000520765 532 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.04□□□□□ -2.24
TFF3Q07654 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.04□□□□□ -2.24
TFF3Q07654 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.04□□□□□ -2.24
TFF3Q07654 AC068135.2-201ENST00000569293 1028 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.04□□□□□ -2.24
TFF3Q07654 AC067838.1-201ENST00000606064 577 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AL050343.2-201ENST00000607338 280 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC1.04□□□□□ -2.24
TFF3Q07654 AP001486.3-201ENST00000615334 372 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 HMGB1P24-202ENST00000615653 685 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 AC091304.6-201ENST00000619761 202 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
TFF3Q07654 MTND5P12-201ENST00000502851 1449 ntBASIC1.04□□□□□ -2.24
TFF3Q07654 MTND5P3-201ENST00000438536 1800 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.03□□□□□ -2.24
TFF3Q07654 MIR613-201ENST00000385248 95 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AC016769.3-201ENST00000396562 315 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 DNAJC19P6-201ENST00000401853 280 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.03□□□□□ -2.24
TFF3Q07654 MTCYBP7-201ENST00000419540 1134 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AL353898.1-201ENST00000444055 238 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 MTCO3P35-201ENST00000485582 781 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC1.03□□□□□ -2.24
TFF3Q07654 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.03□□□□□ -2.24
TFF3Q07654 MTCO2P32-201ENST00000514865 403 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 ERHP1-201ENST00000523006 310 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AP004247.1-201ENST00000531556 1289 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.03□□□□□ -2.24
TFF3Q07654 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.03□□□□□ -2.24
TFF3Q07654 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.03□□□□□ -2.24
TFF3Q07654 HSBP1P1-201ENST00000555205 166 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 GLUD1P4-201ENST00000590914 418 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.03□□□□□ -2.24
TFF3Q07654 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.03□□□□□ -2.24
TFF3Q07654 AL109918.3-201ENST00000603072 338 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AC126118.1-201ENST00000607744 628 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 MIR6788-201ENST00000618842 66 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 AC068620.4-201ENST00000636730 1182 ntBASIC1.03□□□□□ -2.24
TFF3Q07654 MIR153-1-201ENST00000384914 90 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 RNU2-41P-201ENST00000410991 178 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 HMGB1P49-201ENST00000418882 569 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 SNRPEP10-201ENST00000420249 274 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 MTND5P25-201ENST00000430499 799 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.02□□□□□ -2.25
TFF3Q07654 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.02□□□□□ -2.25
TFF3Q07654 AC091812.1-201ENST00000432235 1948 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
TFF3Q07654 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.02□□□□□ -2.25
TFF3Q07654 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.02□□□□□ -2.25
TFF3Q07654 AC023050.1-201ENST00000498198 304 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC010627.1-201ENST00000503819 1294 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 OR5BM1P-201ENST00000512021 366 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.02□□□□□ -2.25
TFF3Q07654 FABP5P5-201ENST00000515537 406 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 RNU6-1223P-201ENST00000517124 104 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.02□□□□□ -2.25
TFF3Q07654 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.02□□□□□ -2.25
TFF3Q07654 AP005660.1-201ENST00000522972 293 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.02□□□□□ -2.25
TFF3Q07654 MTATP6P3-201ENST00000581686 676 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC090616.3-201ENST00000582184 217 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 MIR151B-201ENST00000584249 96 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AL355297.2-201ENST00000604792 129 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC097504.2-201ENST00000608088 454 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC107214.2-201ENST00000608204 634 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 AC083806.3-201ENST00000614016 455 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 MIR6515-201ENST00000619843 57 ntBASIC1.02□□□□□ -2.25
TFF3Q07654 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
TFF3Q07654 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
TFF3Q07654 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.01□□□□□ -2.25
TFF3Q07654 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TFF3Q07654 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
TFF3Q07654 RNU6-1032P-201ENST00000384100 107 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 BMI1P1-201ENST00000445879 941 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.01□□□□□ -2.25
TFF3Q07654 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.01□□□□□ -2.25
TFF3Q07654 AC092155.2-201ENST00000454675 477 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 NCOR1P1-202ENST00000486162 291 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 ARL2BPP4-201ENST00000506854 471 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 AC105914.1-201ENST00000511798 226 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.01□□□□□ -2.25
TFF3Q07654 AC008269.2-201ENST00000561915 1105 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 AC003001.2-201ENST00000616294 831 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 PVT1_3.1-201ENST00000620853 95 ntBASIC1.01□□□□□ -2.25
TFF3Q07654 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.01□□□□□ -2.25
TFF3Q07654 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TFF3Q07654 AL356473.1-201ENST00000406203 1408 ntBASIC1□□□□□ -2.25
TFF3Q07654 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1□□□□□ -2.25
TFF3Q07654 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1□□□□□ -2.25
TFF3Q07654 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1□□□□□ -2.25
TFF3Q07654 TRAPPC2P4-201ENST00000421750 331 ntBASIC1□□□□□ -2.25
TFF3Q07654 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms