Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
HOXC5Q00444 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC5Q00444 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC5Q00444 AC005297.2-201ENST00000450430 606 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC5Q00444 USP9YP34-201ENST00000453983 808 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AL139109.1-201ENST00000455491 297 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 RPL9P6-201ENST00000492764 598 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC5Q00444 AP002748.2-201ENST00000528671 348 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC5Q00444 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC5Q00444 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC5Q00444 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC5Q00444 ZNF971P-201ENST00000562068 1249 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AC009127.3-201ENST00000570531 403 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.85□□□□□ -2.11
HOXC5Q00444 MIR5089-201ENST00000580047 84 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.85□□□□□ -2.11
HOXC5Q00444 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.85□□□□□ -2.11
HOXC5Q00444 AP002906.1-201ENST00000603405 233 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AP003973.1-201ENST00000604639 691 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AC120053.1-201ENST00000607706 736 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AP000238.1-201ENST00000608759 426 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HOXC5Q00444 KPNA2P1-201ENST00000458289 1591 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 MTND4P21-201ENST00000453886 1357 ntBASIC1.85□□□□□ -2.11
HOXC5Q00444 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
HOXC5Q00444 RNU6-76P-201ENST00000384060 104 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 U6.112-201ENST00000384129 70 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 RNU1-52P-201ENST00000384190 164 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 MIR514A1-201ENST00000385133 98 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 MIR634-201ENST00000385208 97 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AP002784.2-201ENST00000397300 549 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AL355497.1-201ENST00000406262 551 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 SNORA3.2-201ENST00000408221 125 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AL030996.1-201ENST00000411430 235 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 NDUFB4P7-201ENST00000423198 363 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC098614.2-201ENST00000426040 255 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AL590383.1-201ENST00000428602 75 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC5Q00444 BMI1P1-201ENST00000445879 941 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC233279.1-201ENST00000455300 423 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC107626.1-201ENST00000471084 183 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC5Q00444 UBE2DNL-203ENST00000474922 222 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC5Q00444 AC022493.1-201ENST00000492984 337 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
HOXC5Q00444 AC008427.1-201ENST00000503102 655 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC5Q00444 AC112518.2-201ENST00000508565 425 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC022483.1-201ENST00000514020 567 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC119751.5-201ENST00000514077 770 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 SCARNA17.1-201ENST00000516211 143 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 SCARNA17.2-201ENST00000516334 143 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 MIR514B-201ENST00000516774 80 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 SNORA31.22-201ENST00000517204 135 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC5Q00444 NDUFS5P6-201ENST00000529136 295 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC5Q00444 ANP32BP3-201ENST00000559213 706 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC5Q00444 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.84□□□□□ -2.11
HOXC5Q00444 HMGN2P15-201ENST00000585707 270 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.84□□□□□ -2.11
HOXC5Q00444 AC093838.1-201ENST00000613014 469 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 SCARNA17.4-201ENST00000614296 143 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC245884.12-201ENST00000615364 59 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AC008443.7-201ENST00000622195 246 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AL031601.2-202ENST00000622650 282 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 AP003399.1-201ENST00000637534 361 ntBASIC1.84□□□□□ -2.11
HOXC5Q00444 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
HOXC5Q00444 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.12
HOXC5Q00444 AC131280.1-202ENST00000624067 4211 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AL049641.1-201ENST00000441055 1948 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC5Q00444 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC5Q00444 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
HOXC5Q00444 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
HOXC5Q00444 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC5Q00444 DEFB130D-201ENST00000426866 237 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AL353691.1-201ENST00000451332 387 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 CCNB1IP1P3-201ENST00000454702 829 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC5Q00444 RPS27P21-201ENST00000486977 252 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 MTAPP1-201ENST00000489154 819 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 RN7SL274P-201ENST00000492268 272 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AC008549.1-201ENST00000512900 643 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.83□□□□□ -2.12
HOXC5Q00444 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.83□□□□□ -2.12
HOXC5Q00444 RNU5A-7P-201ENST00000515979 116 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXC5Q00444 AC006518.2-201ENST00000542513 940 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 OR11H5P-201ENST00000554039 926 ntBASIC1.83□□□□□ -2.12
HOXC5Q00444 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.83□□□□□ -2.12
HOXC5Q00444 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms