Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
IRX3P78415 RNU4-51P-201ENST00000364206 140 ntBASIC2.78□□□□□ -1.96
IRX3P78415 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 LUZP4P1-201ENST00000415420 344 ntBASIC2.78□□□□□ -1.96
IRX3P78415 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 WARS2P1-201ENST00000429678 537 ntBASIC2.78□□□□□ -1.96
IRX3P78415 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.78□□□□□ -1.96
IRX3P78415 COX6CP12-201ENST00000446748 202 ntBASIC2.78□□□□□ -1.96
IRX3P78415 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
IRX3P78415 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.78□□□□□ -1.96
IRX3P78415 AC096751.1-202ENST00000502691 1067 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC006390.1-201ENST00000508068 283 ntBASIC2.78□□□□□ -1.96
IRX3P78415 MTCYBP16-201ENST00000509187 1129 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC026436.1-201ENST00000510537 270 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.78□□□□□ -1.96
IRX3P78415 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 SNRPGP16-201ENST00000533275 226 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC125611.1-201ENST00000549563 229 ntBASIC2.78□□□□□ -1.96
IRX3P78415 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.78□□□□□ -1.96
IRX3P78415 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 HSPE1P3-201ENST00000559254 309 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC122134.1-202ENST00000569111 1201 ntBASIC2.78□□□□□ -1.96
IRX3P78415 MIR5708-201ENST00000579723 85 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 AP001330.4-201ENST00000604350 154 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC092574.1-201ENST00000609771 420 ntBASIC2.78□□□□□ -1.96
IRX3P78415 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.78□□□□□ -1.96
IRX3P78415 AC009090.3-201ENST00000616553 565 ntBASIC2.78□□□□□ -1.96
IRX3P78415 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
IRX3P78415 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
IRX3P78415 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.78□□□□□ -1.96
IRX3P78415 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
IRX3P78415 AL137003.2-201ENST00000606924 2538 ntBASIC2.77□□□□□ -1.97
IRX3P78415 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
IRX3P78415 FRG1BP-201ENST00000278882 761 ntBASIC2.77□□□□□ -1.97
IRX3P78415 RNU6-216P-201ENST00000363282 104 ntBASIC2.77□□□□□ -1.97
IRX3P78415 RNU6-173P-201ENST00000364215 104 ntBASIC2.77□□□□□ -1.97
IRX3P78415 RNU6-1074P-201ENST00000383995 104 ntBASIC2.77□□□□□ -1.97
IRX3P78415 SNORD65.1-201ENST00000390889 71 ntBASIC2.77□□□□□ -1.97
IRX3P78415 Y_RNA.578-201ENST00000390903 88 ntBASIC2.77□□□□□ -1.97
IRX3P78415 RNA5SP354-201ENST00000391247 136 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AL603865.2-201ENST00000401679 213 ntBASIC2.77□□□□□ -1.97
IRX3P78415 RNU2-15P-201ENST00000410692 191 ntBASIC2.77□□□□□ -1.97
IRX3P78415 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.77□□□□□ -1.97
IRX3P78415 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.77□□□□□ -1.97
IRX3P78415 AC007435.1-201ENST00000421086 415 ntBASIC2.77□□□□□ -1.97
IRX3P78415 HMGN2P38-201ENST00000423806 265 ntBASIC2.77□□□□□ -1.97
IRX3P78415 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.77□□□□□ -1.97
IRX3P78415 HMGN1P5-201ENST00000448591 263 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.77□□□□□ -1.97
IRX3P78415 RFC5P1-201ENST00000454419 874 ntBASIC2.77□□□□□ -1.97
IRX3P78415 RPL36AP51-201ENST00000487216 318 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.77□□□□□ -1.97
IRX3P78415 AC090255.1-201ENST00000495779 349 ntBASIC2.77□□□□□ -1.97
IRX3P78415 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.77□□□□□ -1.97
IRX3P78415 SNORA31.18-201ENST00000517043 134 ntBASIC2.77□□□□□ -1.97
IRX3P78415 OR4P1P-201ENST00000530808 1136 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AC123904.3-201ENST00000547218 814 ntBASIC2.77□□□□□ -1.97
IRX3P78415 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
IRX3P78415 AC010546.1-201ENST00000569391 485 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AL445435.1-201ENST00000604232 665 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AP001521.1-201ENST00000609150 300 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.77□□□□□ -1.97
IRX3P78415 AL161629.2-201ENST00000615347 275 ntBASIC2.77□□□□□ -1.97
IRX3P78415 MIR6873-201ENST00000622788 63 ntBASIC2.77□□□□□ -1.97
IRX3P78415 AC091925.2-201ENST00000625059 256 ntBASIC2.77□□□□□ -1.97
IRX3P78415 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.77□□□□□ -1.97
IRX3P78415 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.77□□□□□ -1.97
IRX3P78415 AC010680.1-201ENST00000590024 3590 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC097714.1-201ENST00000511272 1647 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC107982.1-201ENST00000507171 1300 ntBASIC2.76□□□□□ -1.97
IRX3P78415 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
IRX3P78415 RNU6-1000P-201ENST00000391066 106 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC016769.3-201ENST00000396562 315 ntBASIC2.76□□□□□ -1.97
IRX3P78415 RNU4-26P-201ENST00000410270 107 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 RPL27AP8-201ENST00000424277 446 ntBASIC2.76□□□□□ -1.97
IRX3P78415 MTCO2P17-201ENST00000424336 677 ntBASIC2.76□□□□□ -1.97
IRX3P78415 MTCO3P30-201ENST00000426425 670 ntBASIC2.76□□□□□ -1.97
IRX3P78415 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.76□□□□□ -1.97
IRX3P78415 AC096638.1-201ENST00000444678 216 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.76□□□□□ -1.97
IRX3P78415 VN1R10P-201ENST00000447106 875 ntBASIC2.76□□□□□ -1.97
IRX3P78415 COX6CP18-201ENST00000448769 222 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC079776.3-201ENST00000450665 370 ntBASIC2.76□□□□□ -1.97
IRX3P78415 Y_RNA.638-201ENST00000459374 113 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC114981.1-201ENST00000503897 678 ntBASIC2.76□□□□□ -1.97
IRX3P78415 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 RNU6-27P-201ENST00000516146 107 ntBASIC2.76□□□□□ -1.97
IRX3P78415 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.76□□□□□ -1.97
IRX3P78415 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.76□□□□□ -1.97
IRX3P78415 SETP7-201ENST00000552169 453 ntBASIC2.76□□□□□ -1.97
IRX3P78415 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms