Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 RNA5SP338-201ENST00000410495 85 ntBASIC1.87□□□□□ -2.11
LSM6P62312 AC096649.2-201ENST00000416186 393 ntBASIC1.87□□□□□ -2.11
LSM6P62312 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LSM6P62312 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 MTND2P24-201ENST00000453434 806 ntBASIC1.87□□□□□ -2.11
LSM6P62312 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LSM6P62312 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 AC112518.2-201ENST00000508565 425 ntBASIC1.87□□□□□ -2.11
LSM6P62312 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
LSM6P62312 AC027309.2-201ENST00000520566 192 ntBASIC1.87□□□□□ -2.11
LSM6P62312 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LSM6P62312 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
LSM6P62312 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
LSM6P62312 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.87□□□□□ -2.11
LSM6P62312 AL450472.3-201ENST00000615578 367 ntBASIC1.87□□□□□ -2.11
LSM6P62312 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.87□□□□□ -2.11
LSM6P62312 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
LSM6P62312 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.87□□□□□ -2.11
LSM6P62312 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM6P62312 CENPCP1-201ENST00000533085 2578 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RNU4-82P-201ENST00000362443 140 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RNA5SP138-201ENST00000365098 114 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RNU6-741P-201ENST00000383889 107 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RNU6-217P-201ENST00000384164 104 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RNU6-750P-201ENST00000390946 107 ntBASIC1.86□□□□□ -2.11
LSM6P62312 HMGB1P17-201ENST00000403495 628 ntBASIC1.86□□□□□ -2.11
LSM6P62312 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
LSM6P62312 FCF1P2-201ENST00000415284 583 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.86□□□□□ -2.11
LSM6P62312 RPS15AP5-201ENST00000436276 388 ntBASIC1.86□□□□□ -2.11
LSM6P62312 BNIP3P2-201ENST00000441221 577 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AL591719.1-201ENST00000444669 744 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM6P62312 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AC098799.1-201ENST00000504752 800 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM6P62312 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM6P62312 RNU6-1256P-201ENST00000516539 103 ntBASIC1.86□□□□□ -2.11
LSM6P62312 RNA5SP291-201ENST00000517222 105 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM6P62312 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.86□□□□□ -2.11
LSM6P62312 OR4K8P-201ENST00000578842 1048 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.86□□□□□ -2.11
LSM6P62312 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
LSM6P62312 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AC068057.2-201ENST00000624047 895 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AC132825.7-201ENST00000638744 335 ntBASIC1.86□□□□□ -2.11
LSM6P62312 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.86□□□□□ -2.11
LSM6P62312 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
LSM6P62312 MTND4P1-201ENST00000457501 1466 ntBASIC1.86□□□□□ -2.11
LSM6P62312 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
LSM6P62312 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.86□□□□□ -2.11
LSM6P62312 AC004520.1-201ENST00000608362 1413 ntBASIC1.85□□□□□ -2.11
LSM6P62312 HSPE1P11-201ENST00000339579 310 ntBASIC1.85□□□□□ -2.11
LSM6P62312 ANKRD36P1-201ENST00000344424 659 ntBASIC1.85□□□□□ -2.11
LSM6P62312 SNORA16B-201ENST00000364674 135 ntBASIC1.85□□□□□ -2.11
LSM6P62312 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LSM6P62312 MTCO2P31-201ENST00000402702 684 ntBASIC1.85□□□□□ -2.11
LSM6P62312 RNU6-1328P-201ENST00000410938 106 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC018630.2-202ENST00000422992 927 ntBASIC1.85□□□□□ -2.11
LSM6P62312 PTP4A1P7-201ENST00000423476 514 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM6P62312 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM6P62312 MYL8P-204ENST00000431574 518 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM6P62312 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM6P62312 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM6P62312 KLF3P2-201ENST00000465138 268 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM6P62312 AC091917.2-201ENST00000505002 744 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC104090.1-201ENST00000506341 1171 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC017037.2-201ENST00000513850 890 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM6P62312 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
LSM6P62312 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
LSM6P62312 RNA5SP135-201ENST00000517019 125 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
LSM6P62312 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.85□□□□□ -2.11
LSM6P62312 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.85□□□□□ -2.11
LSM6P62312 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.85□□□□□ -2.11
LSM6P62312 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM6P62312 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.85□□□□□ -2.11
LSM6P62312 DUXAP11-201ENST00000603858 526 ntBASIC1.85□□□□□ -2.11
LSM6P62312 RMST_10.1-201ENST00000616309 154 ntBASIC1.85□□□□□ -2.11
LSM6P62312 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.85□□□□□ -2.11
LSM6P62312 AC006213.5-201ENST00000619673 288 ntBASIC1.85□□□□□ -2.11
LSM6P62312 AC098657.3-201ENST00000620434 263 ntBASIC1.85□□□□□ -2.11
LSM6P62312 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.85□□□□□ -2.11
LSM6P62312 AP003400.5-201ENST00000624827 617 ntBASIC1.85□□□□□ -2.11
LSM6P62312 IGHVIII-44-202ENST00000636235 289 ntBASIC1.85□□□□□ -2.11
LSM6P62312 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
LSM6P62312 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.84□□□□□ -2.11
LSM6P62312 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
LSM6P62312 OR56A5-201ENST00000340110 738 ntBASIC1.84□□□□□ -2.11
LSM6P62312 XGY1-201ENST00000381172 446 ntBASIC1.84□□□□□ -2.11
LSM6P62312 SNORD116-23-201ENST00000384645 92 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms