Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 HMGN1P12-201ENST00000499125 195 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC114967.1-201ENST00000504890 259 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 HMGB1P22-201ENST00000505315 124 ntBASIC2.9□□□□□ -1.95
LMO4P61968 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 BTF3L4P4-201ENST00000506381 449 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 AC004062.1-201ENST00000509926 645 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 SNORA74D-201ENST00000516404 141 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 IGKV2-26-201ENST00000518305 343 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LMO4P61968 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.9□□□□□ -1.95
LMO4P61968 AL512310.1-201ENST00000548639 172 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 AC126177.3-201ENST00000551839 688 ntBASIC2.9□□□□□ -1.95
LMO4P61968 ANP32BP3-201ENST00000559213 706 ntBASIC2.9□□□□□ -1.95
LMO4P61968 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.9□□□□□ -1.95
LMO4P61968 MIR3690-201ENST00000580266 75 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.9□□□□□ -1.95
LMO4P61968 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 MIR8058-201ENST00000615737 89 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC010338.1-201ENST00000621823 717 ntBASIC2.9□□□□□ -1.95
LMO4P61968 AC091925.2-201ENST00000625059 256 ntBASIC2.9□□□□□ -1.95
LMO4P61968 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.9□□□□□ -1.95
LMO4P61968 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 MIR3651-201ENST00000630427 90 ntBASIC2.9□□□□□ -1.95
LMO4P61968 MIR3662-201ENST00000637030 95 ntBASIC2.9□□□□□ -1.95
LMO4P61968 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LMO4P61968 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
LMO4P61968 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
LMO4P61968 RPS4XP5-202ENST00000449995 1334 ntBASIC2.9□□□□□ -1.95
LMO4P61968 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
LMO4P61968 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
LMO4P61968 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LMO4P61968 EXOC5P1-201ENST00000510543 1969 ntBASIC2.89□□□□□ -1.95
LMO4P61968 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
LMO4P61968 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
LMO4P61968 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
LMO4P61968 RNU6-1011P-201ENST00000384668 107 ntBASIC2.89□□□□□ -1.95
LMO4P61968 HMGN2P8-201ENST00000391458 268 ntBASIC2.89□□□□□ -1.95
LMO4P61968 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LMO4P61968 OR1AA1P-201ENST00000419597 916 ntBASIC2.89□□□□□ -1.95
LMO4P61968 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC2.89□□□□□ -1.95
LMO4P61968 AC005300.1-201ENST00000428401 373 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC005326.1-201ENST00000429197 123 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC104850.1-201ENST00000435940 476 ntBASIC2.89□□□□□ -1.95
LMO4P61968 HMGB1P12-201ENST00000438594 598 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.89□□□□□ -1.95
LMO4P61968 AC132479.1-201ENST00000449160 144 ntBASIC2.89□□□□□ -1.95
LMO4P61968 ANP32BP2-201ENST00000454525 545 ntBASIC2.89□□□□□ -1.95
LMO4P61968 MTND1P12-201ENST00000455231 147 ntBASIC2.89□□□□□ -1.95
LMO4P61968 snoU13.4-201ENST00000458916 104 ntBASIC2.89□□□□□ -1.95
LMO4P61968 RN7SL807P-201ENST00000470923 297 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC090453.1-201ENST00000495560 436 ntBASIC2.89□□□□□ -1.95
LMO4P61968 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LMO4P61968 AC114786.4-201ENST00000508771 728 ntBASIC2.89□□□□□ -1.95
LMO4P61968 MTND3P22-201ENST00000510932 243 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC022616.6-201ENST00000520479 119 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.89□□□□□ -1.95
LMO4P61968 AC090281.1-201ENST00000523019 276 ntBASIC2.89□□□□□ -1.95
LMO4P61968 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LMO4P61968 AC024224.1-201ENST00000538284 609 ntBASIC2.89□□□□□ -1.95
LMO4P61968 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC2.89□□□□□ -1.95
LMO4P61968 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.89□□□□□ -1.95
LMO4P61968 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.89□□□□□ -1.95
LMO4P61968 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.89□□□□□ -1.95
LMO4P61968 AC116096.1-201ENST00000566804 2314 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.89□□□□□ -1.95
LMO4P61968 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.89□□□□□ -1.95
LMO4P61968 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 BBIP1P1-201ENST00000602999 279 ntBASIC2.89□□□□□ -1.95
LMO4P61968 ACTR3BP1-201ENST00000605584 1247 ntBASIC2.89□□□□□ -1.95
LMO4P61968 AC010133.1-201ENST00000615809 842 ntBASIC2.89□□□□□ -1.95
LMO4P61968 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LMO4P61968 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC2.89□□□□□ -1.95
LMO4P61968 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.89□□□□□ -1.95
LMO4P61968 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
LMO4P61968 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LMO4P61968 MFSD8-233ENST00000641482 4860 ntBASIC2.88□□□□□ -1.95
LMO4P61968 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC2.88□□□□□ -1.95
LMO4P61968 OTUD4P1-201ENST00000237841 3067 ntBASIC2.88□□□□□ -1.95
LMO4P61968 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LMO4P61968 Y_RNA.159-201ENST00000363674 87 ntBASIC2.88□□□□□ -1.95
LMO4P61968 Y_RNA.279-201ENST00000364763 95 ntBASIC2.88□□□□□ -1.95
LMO4P61968 Y_RNA.509-201ENST00000384506 99 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms