Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
SRP54P61011 AC009487.2-201ENST00000420969 6821 ntBASIC2.93□□□□□ -1.94
SRP54P61011 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 RNU1-39P-201ENST00000383897 165 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AL109755.1-201ENST00000401791 649 ntBASIC2.93□□□□□ -1.94
SRP54P61011 MTND4P13-201ENST00000402078 1023 ntBASIC2.93□□□□□ -1.94
SRP54P61011 TXNP7-201ENST00000406296 293 ntBASIC2.93□□□□□ -1.94
SRP54P61011 RPL19P1-201ENST00000411635 428 ntBASIC2.93□□□□□ -1.94
SRP54P61011 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.93□□□□□ -1.94
SRP54P61011 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP54P61011 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 AL139132.1-201ENST00000431587 344 ntBASIC2.93□□□□□ -1.94
SRP54P61011 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.93□□□□□ -1.94
SRP54P61011 Z73417.1-201ENST00000447373 778 ntBASIC2.93□□□□□ -1.94
SRP54P61011 snoU13.28-201ENST00000459235 104 ntBASIC2.93□□□□□ -1.94
SRP54P61011 RPS29P26-201ENST00000477483 171 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC104685.1-201ENST00000502445 371 ntBASIC2.93□□□□□ -1.94
SRP54P61011 MTND5P4-201ENST00000514978 288 ntBASIC2.93□□□□□ -1.94
SRP54P61011 RNA5SP291-201ENST00000517222 105 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.93□□□□□ -1.94
SRP54P61011 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 AL136363.1-201ENST00000605349 337 ntBASIC2.93□□□□□ -1.94
SRP54P61011 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP54P61011 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC107871.2-201ENST00000612894 502 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AL161629.2-201ENST00000615347 275 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC010133.1-201ENST00000615809 842 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AP000676.3-201ENST00000623299 569 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AL356596.1-201ENST00000624230 379 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC103706.2-201ENST00000638080 240 ntBASIC2.93□□□□□ -1.94
SRP54P61011 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP54P61011 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.93□□□□□ -1.94
SRP54P61011 AP003122.5-201ENST00000527668 3766 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC099654.7-201ENST00000635788 2127 ntBASIC2.93□□□□□ -1.94
SRP54P61011 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.93□□□□□ -1.94
SRP54P61011 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AC008669.1-201ENST00000565823 2178 ntBASIC2.93□□□□□ -1.94
SRP54P61011 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 MAPK10-266ENST00000641066 6555 ntBASIC2.92□□□□□ -1.94
SRP54P61011 MTND5P33-201ENST00000571250 1450 ntBASIC2.92□□□□□ -1.94
SRP54P61011 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SRP54P61011 RNU6-433P-201ENST00000363216 104 ntBASIC2.92□□□□□ -1.94
SRP54P61011 RNA5SP88-201ENST00000365560 109 ntBASIC2.92□□□□□ -1.94
SRP54P61011 MIR1289-1-201ENST00000408836 144 ntBASIC2.92□□□□□ -1.94
SRP54P61011 RNU2-33P-201ENST00000410344 192 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL359704.1-201ENST00000411586 781 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL513331.1-201ENST00000411908 397 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL008987.1-201ENST00000415528 237 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 ATG3P1-201ENST00000419507 911 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL451054.2-201ENST00000420896 202 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 AC092047.1-201ENST00000424997 240 ntBASIC2.92□□□□□ -1.94
SRP54P61011 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.92□□□□□ -1.94
SRP54P61011 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.92□□□□□ -1.94
SRP54P61011 PIGFP3-201ENST00000441918 722 ntBASIC2.92□□□□□ -1.94
SRP54P61011 MTCO3P45-201ENST00000443036 613 ntBASIC2.92□□□□□ -1.94
SRP54P61011 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 RPL23AP20-201ENST00000447965 421 ntBASIC2.92□□□□□ -1.94
SRP54P61011 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.92□□□□□ -1.94
SRP54P61011 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.92□□□□□ -1.94
SRP54P61011 AP1S2P1-201ENST00000457344 379 ntBASIC2.92□□□□□ -1.94
SRP54P61011 LARP1BP2-201ENST00000486594 519 ntBASIC2.92□□□□□ -1.94
SRP54P61011 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 RNA5SP76-201ENST00000516277 87 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.92□□□□□ -1.94
SRP54P61011 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SRP54P61011 AC107016.2-201ENST00000547968 190 ntBASIC2.92□□□□□ -1.94
SRP54P61011 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.92□□□□□ -1.94
SRP54P61011 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.92□□□□□ -1.94
SRP54P61011 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.92□□□□□ -1.94
SRP54P61011 TPMTP1-201ENST00000592307 737 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.92□□□□□ -1.94
SRP54P61011 DUXAP4-201ENST00000603046 613 ntBASIC2.92□□□□□ -1.94
SRP54P61011 U73023.1-201ENST00000603134 700 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL161729.4-201ENST00000604650 476 ntBASIC2.92□□□□□ -1.94
SRP54P61011 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SRP54P61011 AC097468.3-201ENST00000607956 456 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL359198.2-201ENST00000611836 194 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AL050303.3-201ENST00000613704 284 ntBASIC2.92□□□□□ -1.94
SRP54P61011 AC004852.3-201ENST00000614131 326 ntBASIC2.92□□□□□ -1.94
SRP54P61011 SDR42E1P2-201ENST00000614861 481 ntBASIC2.92□□□□□ -1.94
SRP54P61011 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.92□□□□□ -1.94
SRP54P61011 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
SRP54P61011 AC108206.1-201ENST00000570186 4159 ntBASIC2.92□□□□□ -1.94
SRP54P61011 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.92□□□□□ -1.94
SRP54P61011 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SRP54P61011 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SRP54P61011 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SRP54P61011 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SRP54P61011 SNORA5B-201ENST00000363786 132 ntBASIC2.91□□□□□ -1.94
SRP54P61011 Y_RNA.510-201ENST00000384511 114 ntBASIC2.91□□□□□ -1.94
SRP54P61011 RNU6-851P-201ENST00000384565 107 ntBASIC2.91□□□□□ -1.94
SRP54P61011 RNA5SP274-201ENST00000410484 108 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms