Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SYF2P1-201ENST00000550658 413 ntBASIC3.01□□□□□ -1.93
PEX3P56589 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
PEX3P56589 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.01□□□□□ -1.93
PEX3P56589 AC112187.2-201ENST00000604345 283 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AC107214.2-201ENST00000608204 634 ntBASIC3.01□□□□□ -1.93
PEX3P56589 AC122133.1-201ENST00000613964 233 ntBASIC3.01□□□□□ -1.93
PEX3P56589 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.01□□□□□ -1.93
PEX3P56589 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.01□□□□□ -1.93
PEX3P56589 AC006927.3-201ENST00000638789 384 ntBASIC3.01□□□□□ -1.93
PEX3P56589 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
PEX3P56589 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.01□□□□□ -1.93
PEX3P56589 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PEX3P56589 AL161431.1-201ENST00000618966 4205 ntBASIC3.01□□□□□ -1.93
PEX3P56589 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3□□□□□ -1.93
PEX3P56589 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3□□□□□ -1.93
PEX3P56589 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3□□□□□ -1.93
PEX3P56589 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
PEX3P56589 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3□□□□□ -1.93
PEX3P56589 RNU6-1181P-201ENST00000384191 106 ntBASIC3□□□□□ -1.93
PEX3P56589 MIR181B1-201ENST00000385240 110 ntBASIC3□□□□□ -1.93
PEX3P56589 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3□□□□□ -1.93
PEX3P56589 AL360182.1-201ENST00000397433 468 ntBASIC3□□□□□ -1.93
PEX3P56589 AL136372.1-201ENST00000403060 228 ntBASIC3□□□□□ -1.93
PEX3P56589 AL356421.1-201ENST00000403255 413 ntBASIC3□□□□□ -1.93
PEX3P56589 AL031577.2-201ENST00000404133 280 ntBASIC3□□□□□ -1.93
PEX3P56589 BMS1P22-201ENST00000414726 313 ntBASIC3□□□□□ -1.93
PEX3P56589 Z99497.1-201ENST00000421282 135 ntBASIC3□□□□□ -1.93
PEX3P56589 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3□□□□□ -1.93
PEX3P56589 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3□□□□□ -1.93
PEX3P56589 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3□□□□□ -1.93
PEX3P56589 OR6K1P-201ENST00000456766 971 ntBASIC3□□□□□ -1.93
PEX3P56589 AC090525.1-201ENST00000479116 478 ntBASIC3□□□□□ -1.93
PEX3P56589 RNA5SP356-201ENST00000515972 94 ntBASIC3□□□□□ -1.93
PEX3P56589 RNA5SP76-201ENST00000516277 87 ntBASIC3□□□□□ -1.93
PEX3P56589 SNORA9.3-201ENST00000516383 129 ntBASIC3□□□□□ -1.93
PEX3P56589 RNU1-103P-201ENST00000516502 125 ntBASIC3□□□□□ -1.93
PEX3P56589 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3□□□□□ -1.93
PEX3P56589 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3□□□□□ -1.93
PEX3P56589 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3□□□□□ -1.93
PEX3P56589 OR4K8P-201ENST00000578842 1048 ntBASIC3□□□□□ -1.93
PEX3P56589 AC008088.1-201ENST00000580993 280 ntBASIC3□□□□□ -1.93
PEX3P56589 MIR4307-201ENST00000582802 84 ntBASIC3□□□□□ -1.93
PEX3P56589 MIR3605-201ENST00000583214 100 ntBASIC3□□□□□ -1.93
PEX3P56589 AP001429.1-201ENST00000602568 530 ntBASIC3□□□□□ -1.93
PEX3P56589 AL031176.1-201ENST00000604554 466 ntBASIC3□□□□□ -1.93
PEX3P56589 AC007619.2-201ENST00000605743 379 ntBASIC3□□□□□ -1.93
PEX3P56589 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3□□□□□ -1.93
PEX3P56589 AC069234.5-201ENST00000611056 416 ntBASIC3□□□□□ -1.93
PEX3P56589 MIR6130-201ENST00000619419 109 ntBASIC3□□□□□ -1.93
PEX3P56589 AC068057.2-201ENST00000624047 895 ntBASIC3□□□□□ -1.93
PEX3P56589 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3□□□□□ -1.93
PEX3P56589 CRYM-AS1-204ENST00000637983 556 ntBASIC3□□□□□ -1.93
PEX3P56589 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3□□□□□ -1.93
PEX3P56589 MTND5P33-201ENST00000571250 1450 ntBASIC3□□□□□ -1.93
PEX3P56589 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3□□□□□ -1.93
PEX3P56589 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
PEX3P56589 TAB3P1-202ENST00000452645 1634 ntBASIC3□□□□□ -1.93
PEX3P56589 AC009812.4-201ENST00000569134 1805 ntBASIC3□□□□□ -1.93
PEX3P56589 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.99□□□□□ -1.93
PEX3P56589 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PEX3P56589 MIR887-201ENST00000401258 79 ntBASIC2.99□□□□□ -1.93
PEX3P56589 HMGB1P11-201ENST00000413899 637 ntBASIC2.99□□□□□ -1.93
PEX3P56589 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.99□□□□□ -1.93
PEX3P56589 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.99□□□□□ -1.93
PEX3P56589 AC104332.2-201ENST00000429959 156 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AC109583.1-201ENST00000432156 268 ntBASIC2.99□□□□□ -1.93
PEX3P56589 MTCYBP39-201ENST00000437562 491 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 HMGN2P16-201ENST00000456802 261 ntBASIC2.99□□□□□ -1.93
PEX3P56589 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PEX3P56589 AC034222.1-201ENST00000494052 532 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PEX3P56589 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.99□□□□□ -1.93
PEX3P56589 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.99□□□□□ -1.93
PEX3P56589 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.99□□□□□ -1.93
PEX3P56589 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.99□□□□□ -1.93
PEX3P56589 SNORA31.21-201ENST00000517180 77 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.99□□□□□ -1.93
PEX3P56589 AL133271.1-201ENST00000538229 291 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.99□□□□□ -1.93
PEX3P56589 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 AC091489.2-201ENST00000566263 604 ntBASIC2.99□□□□□ -1.93
PEX3P56589 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 MIR3915-201ENST00000578518 97 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AC006504.3-201ENST00000586818 523 ntBASIC2.99□□□□□ -1.93
PEX3P56589 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.99□□□□□ -1.93
PEX3P56589 AC012119.1-201ENST00000603184 222 ntBASIC2.99□□□□□ -1.93
PEX3P56589 MTCYBP22-201ENST00000603788 447 ntBASIC2.99□□□□□ -1.93
PEX3P56589 AC008277.2-201ENST00000605196 797 ntBASIC2.99□□□□□ -1.93
PEX3P56589 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.99□□□□□ -1.93
PEX3P56589 AL356266.1-201ENST00000623311 483 ntBASIC2.99□□□□□ -1.93
PEX3P56589 LRRC77P-213ENST00000637727 880 ntBASIC2.99□□□□□ -1.93
PEX3P56589 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.99□□□□□ -1.93
PEX3P56589 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PEX3P56589 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
PEX3P56589 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms