Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 MIR4444-1-201ENST00000581696 74 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.6□□□□□ -1.83
NR1H2P55055 MIR4444-2-201ENST00000584390 74 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 NRBF2P1-201ENST00000587407 859 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AL606490.9-201ENST00000603331 271 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC087241.4-201ENST00000612441 480 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AC244100.1-202ENST00000621554 382 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 AL732618.1-201ENST00000623251 301 ntBASIC3.6□□□□□ -1.83
NR1H2P55055 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
NR1H2P55055 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.6□□□□□ -1.83
NR1H2P55055 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.59□□□□□ -1.83
NR1H2P55055 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NR1H2P55055 RNU5E-1-201ENST00000362477 120 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RNY1P12-201ENST00000364251 105 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 Y_RNA.333-201ENST00000365274 102 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H2P55055 RNU6-259P-201ENST00000383999 107 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RNU5A-6P-201ENST00000384136 116 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RPL23AP32-201ENST00000395315 459 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RPL21P17-201ENST00000397467 475 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 EI24P2-201ENST00000397776 1076 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RNU2-33P-201ENST00000410344 192 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AC127391.1-201ENST00000411737 98 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RAC1P6-201ENST00000423911 575 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL358472.1-201ENST00000431295 329 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 HMGB1P27-201ENST00000431429 603 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AC104850.1-201ENST00000435940 476 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 MTND1P34-201ENST00000438556 671 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 Z82210.1-201ENST00000440037 231 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 AC140076.1-201ENST00000449897 361 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H2P55055 RN7SL432P-201ENST00000484057 298 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL160314.1-201ENST00000490836 438 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.59□□□□□ -1.83
NR1H2P55055 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.59□□□□□ -1.83
NR1H2P55055 RPL37P25-201ENST00000507308 276 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AC006445.2-201ENST00000510061 472 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 SNORD59.2-201ENST00000516873 68 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 RNU6-711P-201ENST00000517255 106 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 NDUFB9P3-201ENST00000521269 501 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.59□□□□□ -1.83
NR1H2P55055 RPS3AP4-201ENST00000555161 764 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 TGIF1P1-201ENST00000558095 802 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL592436.1-201ENST00000605135 558 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL133173.2-201ENST00000614270 90 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AC006338.1-201ENST00000618453 749 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AL359740.1-201ENST00000624340 592 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 OR5H6-203ENST00000642105 978 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 AC233263.6-201ENST00000631132 1963 ntBASIC3.59□□□□□ -1.83
NR1H2P55055 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NR1H2P55055 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.59□□□□□ -1.84
NR1H2P55055 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
NR1H2P55055 AL161912.2-201ENST00000565707 3007 ntBASIC3.59□□□□□ -1.84
NR1H2P55055 AL021368.2-201ENST00000606125 5352 ntBASIC3.59□□□□□ -1.84
NR1H2P55055 AC058791.1-201ENST00000608412 3198 ntBASIC3.59□□□□□ -1.84
NR1H2P55055 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.59□□□□□ -1.84
NR1H2P55055 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.59□□□□□ -1.84
NR1H2P55055 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H2P55055 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H2P55055 SNORA71.3-201ENST00000362582 128 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 MIR200C-201ENST00000384980 68 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
NR1H2P55055 RPL7P60-201ENST00000397636 735 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 RNU6ATAC-201ENST00000408749 126 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 RNA5SP38-201ENST00000410750 119 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 RNU4-6P-201ENST00000410804 122 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 AL031779.1-201ENST00000415663 330 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 ZNF90P2-204ENST00000419323 1075 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 OR5BE1P-201ENST00000425977 939 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 RPL23AP69-201ENST00000431134 458 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H2P55055 USP9YP15-201ENST00000442391 422 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 AL136380.1-201ENST00000447970 162 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 NANOGNBP1-201ENST00000448444 480 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.58□□□□□ -1.84
NR1H2P55055 AC010401.1-201ENST00000463867 348 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 AC023598.1-201ENST00000472521 361 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 RBM43P1-201ENST00000476891 1081 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H2P55055 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.58□□□□□ -1.84
NR1H2P55055 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 MTCO2P4-201ENST00000517968 247 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.58□□□□□ -1.84
NR1H2P55055 HIGD1AP1-201ENST00000550979 275 ntBASIC3.58□□□□□ -1.84
NR1H2P55055 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.58□□□□□ -1.84
NR1H2P55055 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.58□□□□□ -1.84
NR1H2P55055 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
NR1H2P55055 AC080078.2-201ENST00000603766 501 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms