Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC6.31□□□□□ -1.4
NUBP1P53384 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.31□□□□□ -1.4
NUBP1P53384 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 RNA5SP46-201ENST00000362370 120 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 RNU1-108P-201ENST00000362556 161 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 U8.1-201ENST00000362843 134 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 RNU6-629P-201ENST00000384061 103 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 FTH1P15-201ENST00000406984 280 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 RNA5SP156-201ENST00000410250 110 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 BMS1P17-202ENST00000416720 316 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 Y_RNA.649-201ENST00000459077 103 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 AC093270.2-201ENST00000486157 792 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 RNU6-412P-201ENST00000516434 106 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 AC093331.1-201ENST00000521474 169 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 MIR6809-201ENST00000612189 116 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 AL021997.2-201ENST00000615674 271 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 AL136228.1-201ENST00000622221 319 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 MIR3529-201ENST00000637713 78 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.31□□□□□ -1.4
NUBP1P53384 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 ADAM3A-203ENST00000461344 2157 ntBASIC6.31□□□□□ -1.4
NUBP1P53384 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.31□□□□□ -1.4
NUBP1P53384 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC6.31□□□□□ -1.4
NUBP1P53384 CDH12-201ENST00000382254 4164 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.31□□□□□ -1.4
NUBP1P53384 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
NUBP1P53384 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUBP1P53384 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 AC010329.1-201ENST00000593903 8328 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 RN7SKP103-201ENST00000363848 320 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 U3.26-201ENST00000391236 204 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 RPL35AP31-201ENST00000418340 337 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 AC092047.1-201ENST00000424997 240 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 AC010343.2-201ENST00000510162 224 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 SNORA70.12-201ENST00000516084 153 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
NUBP1P53384 AL591767.3-201ENST00000554632 525 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.3□□□□□ -1.4
NUBP1P53384 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NUBP1P53384 AL031274.2-201ENST00000599419 203 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 IMMP1LP3-201ENST00000604197 224 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 NBPF8-201ENST00000583271 5330 ntBASIC6.3□□□□□ -1.4
NUBP1P53384 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.3□□□□□ -1.4
NUBP1P53384 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
NUBP1P53384 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
NUBP1P53384 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
NUBP1P53384 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.29□□□□□ -1.4
NUBP1P53384 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NUBP1P53384 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 AC083837.1-201ENST00000565297 2994 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.29□□□□□ -1.4
NUBP1P53384 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
NUBP1P53384 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 DLEU2_6.3-201ENST00000340052 136 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 Y_RNA.558-201ENST00000384685 113 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 MIR548A1-201ENST00000385041 97 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 AL645927.1-201ENST00000396783 406 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
NUBP1P53384 RNA5SP390-201ENST00000410191 113 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 RN7SKP125-201ENST00000410481 302 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
NUBP1P53384 AC010285.1-201ENST00000470580 392 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 OR2AO1P-201ENST00000476497 403 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 AC090525.1-201ENST00000479116 478 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 RN7SL727P-201ENST00000482164 296 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC6.29□□□□□ -1.4
NUBP1P53384 RN7SL30P-201ENST00000488416 306 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 RNA5SP154-201ENST00000516193 111 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 SNORA70.16-201ENST00000516390 95 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 SNORA31.16-201ENST00000516773 139 ntBASIC6.29□□□□□ -1.4
NUBP1P53384 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms