Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC068137.3-201ENST00000639191 341 ntBASIC3.43□□□□□ -1.86
CLCNKAP51800 AC073869.6-201ENST00000640656 341 ntBASIC3.43□□□□□ -1.86
CLCNKAP51800 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCNKAP51800 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.43□□□□□ -1.86
CLCNKAP51800 MTCO1P12-201ENST00000414273 1543 ntBASIC3.43□□□□□ -1.86
CLCNKAP51800 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 RNU4-35P-201ENST00000362588 141 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 RNU1-33P-201ENST00000364249 162 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
CLCNKAP51800 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 MIR34B-201ENST00000385076 84 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 SNORD17-201ENST00000390930 237 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC097713.2-201ENST00000430199 356 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC119618.1-201ENST00000434191 222 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.42□□□□□ -1.86
CLCNKAP51800 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 AL451074.3-201ENST00000437709 472 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 USP9YP15-201ENST00000442391 422 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 MTND1P1-201ENST00000445453 368 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 MTND1P9-201ENST00000453775 944 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC114967.1-201ENST00000504890 259 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC007458.1-201ENST00000542812 373 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AL133153.1-201ENST00000557756 303 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 NRBF2P1-201ENST00000587407 859 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AC107304.1-201ENST00000604229 296 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 AC090970.3-201ENST00000612566 866 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AC012314.7-201ENST00000619693 93 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 AC136475.10-201ENST00000620253 385 ntBASIC3.42□□□□□ -1.86
CLCNKAP51800 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.42□□□□□ -1.86
CLCNKAP51800 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.42□□□□□ -1.86
CLCNKAP51800 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
CLCNKAP51800 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLCNKAP51800 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCNKAP51800 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCNKAP51800 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
CLCNKAP51800 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLCNKAP51800 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CLCNKAP51800 Y_RNA.6-201ENST00000362350 114 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 Y_RNA.296-201ENST00000364930 108 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCNKAP51800 MIR490-201ENST00000384865 128 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 RNU6-516P-201ENST00000411381 104 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 UBE2V1P10-201ENST00000414685 269 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 CCDC58P2-201ENST00000417131 366 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCNKAP51800 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC005019.1-201ENST00000436455 431 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 TXNP1-201ENST00000441872 371 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AL359385.1-201ENST00000456509 365 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AC135721.1-201ENST00000497954 479 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 RNA5SP337-201ENST00000517007 109 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 RNU6-1220P-201ENST00000517126 108 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 MTND1P5-201ENST00000517906 940 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 IGHV3-76-201ENST00000522465 295 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AP000857.1-201ENST00000532151 543 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC026333.2-201ENST00000542164 106 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.41□□□□□ -1.86
CLCNKAP51800 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AC087883.1-201ENST00000551882 391 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.41□□□□□ -1.86
CLCNKAP51800 KC877982.1-201ENST00000602313 470 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC245014.2-201ENST00000603689 287 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AL022154.1-201ENST00000604698 785 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AP000860.1-201ENST00000605250 559 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC246785.4-201ENST00000605374 287 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 MIR98-201ENST00000606724 119 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AL161734.1-201ENST00000609720 557 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AC245517.5-201ENST00000611529 162 ntBASIC3.41□□□□□ -1.86
CLCNKAP51800 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.41□□□□□ -1.86
CLCNKAP51800 AC006338.1-201ENST00000618453 749 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms