Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.15□□□□□ -1.58
RNF144AP50876 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.15□□□□□ -1.58
RNF144AP50876 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF144AP50876 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
RNF144AP50876 RNU6-227P-201ENST00000362865 103 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 RNU6-1249P-201ENST00000363237 111 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 SNORA70.6-201ENST00000383934 134 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 RNA5SP187-201ENST00000384400 119 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
RNF144AP50876 RNU6-1168P-201ENST00000390831 104 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AL592148.1-201ENST00000413568 445 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 HMGN2P27-201ENST00000427352 270 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 CFL1P1-202ENST00000432948 411 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF144AP50876 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF144AP50876 AC005002.2-201ENST00000438228 269 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AC083899.1-201ENST00000454465 3819 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 RNY3P16-201ENST00000516338 101 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF144AP50876 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.15□□□□□ -1.59
RNF144AP50876 HMGB1P14-201ENST00000557424 591 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AC008521.2-201ENST00000591021 259 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AC008121.1-201ENST00000603244 268 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AC107294.1-201ENST00000609524 467 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 AC008785.1-201ENST00000624475 456 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 MTND1P7-201ENST00000632801 297 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF144AP50876 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF144AP50876 AC104260.2-201ENST00000623551 3497 ntBASIC5.15□□□□□ -1.59
RNF144AP50876 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF144AP50876 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
RNF144AP50876 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF144AP50876 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF144AP50876 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
RNF144AP50876 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF144AP50876 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF144AP50876 MIR412-201ENST00000362142 91 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.82-201ENST00000363000 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.92-201ENST00000363043 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.235-201ENST00000364412 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.306-201ENST00000365015 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.308-201ENST00000365043 101 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.312-201ENST00000365089 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.322-201ENST00000365151 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 RNU6-21P-201ENST00000384710 107 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.629-201ENST00000411368 105 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 RNF10P1-201ENST00000418589 369 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF144AP50876 AL158156.1-201ENST00000422509 473 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF144AP50876 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF144AP50876 Z82188.1-201ENST00000436709 154 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 LINC02210-201ENST00000444561 288 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF144AP50876 AC144530.1-201ENST00000452862 555 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.650-201ENST00000459002 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 RPS29P27-201ENST00000463711 170 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 RPS17P15-201ENST00000475609 349 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF144AP50876 AC074255.1-201ENST00000511259 501 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 RNU6-615P-201ENST00000516065 106 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.777-201ENST00000516982 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF144AP50876 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF144AP50876 ATP5F1P5-201ENST00000526403 760 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF144AP50876 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF144AP50876 MRPS21P7-201ENST00000566937 238 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 FAM60BP-201ENST00000578364 658 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 AC023575.1-201ENST00000580510 358 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF144AP50876 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.771-201ENST00000598668 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 AP000769.2-201ENST00000602344 396 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 AL161629.2-201ENST00000615347 275 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 Y_RNA.789-201ENST00000622480 102 ntBASIC5.14□□□□□ -1.59
RNF144AP50876 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF144AP50876 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
RNF144AP50876 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF144AP50876 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF144AP50876 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
RNF144AP50876 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF144AP50876 ZNF826P-207ENST00000622273 1910 ntBASIC5.13□□□□□ -1.59
RNF144AP50876 SDAD1P2-201ENST00000441308 2028 ntBASIC5.13□□□□□ -1.59
RNF144AP50876 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms