Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 Y_RNA.490-201ENST00000384413 102 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RNU6-692P-201ENST00000384496 107 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AL590704.1-201ENST00000402856 794 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AL591416.1-201ENST00000404015 867 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RN7SKP235-201ENST00000410662 305 ntBASIC4.62□□□□□ -1.67
MRE11P49959 MTCO3P12-201ENST00000416718 547 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AC012065.2-201ENST00000421295 375 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RPL35AP12-201ENST00000425362 338 ntBASIC4.62□□□□□ -1.67
MRE11P49959 MTCO3P46-201ENST00000425787 232 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.62□□□□□ -1.67
MRE11P49959 ATP5JP1-201ENST00000431631 322 ntBASIC4.62□□□□□ -1.67
MRE11P49959 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.62□□□□□ -1.67
MRE11P49959 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 AC079781.2-201ENST00000446424 169 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RPL7P12-201ENST00000446719 750 ntBASIC4.62□□□□□ -1.67
MRE11P49959 DHFRP3-201ENST00000455595 559 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.62□□□□□ -1.67
MRE11P49959 RNU7-63P-201ENST00000459054 62 ntBASIC4.62□□□□□ -1.67
MRE11P49959 snoU13.7-201ENST00000459220 104 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AP001992.1-205ENST00000462248 379 ntBASIC4.62□□□□□ -1.67
MRE11P49959 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 AC093853.1-201ENST00000515689 483 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 AC023050.3-201ENST00000541142 333 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RPL23AP87-202ENST00000573039 466 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.62□□□□□ -1.67
MRE11P49959 AC098848.2-201ENST00000588023 330 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AC022432.1-201ENST00000595739 310 ntBASIC4.62□□□□□ -1.67
MRE11P49959 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.62□□□□□ -1.67
MRE11P49959 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.62□□□□□ -1.67
MRE11P49959 YWHAQP7-201ENST00000603536 658 ntBASIC4.62□□□□□ -1.67
MRE11P49959 BRDTP1-201ENST00000605735 677 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AL354950.2-201ENST00000617939 290 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AL596245.1-201ENST00000618994 362 ntBASIC4.62□□□□□ -1.67
MRE11P49959 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MRE11P49959 AC006020.1-201ENST00000420179 1854 ntBASIC4.62□□□□□ -1.67
MRE11P49959 RIOK3P1-201ENST00000418778 1528 ntBASIC4.62□□□□□ -1.67
MRE11P49959 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.61□□□□□ -1.67
MRE11P49959 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
MRE11P49959 RNA5SP258-201ENST00000362750 119 ntBASIC4.61□□□□□ -1.67
MRE11P49959 RNU1-130P-201ENST00000363930 160 ntBASIC4.61□□□□□ -1.67
MRE11P49959 RNU6-1243P-201ENST00000364028 107 ntBASIC4.61□□□□□ -1.67
MRE11P49959 RNU1-132P-201ENST00000364300 164 ntBASIC4.61□□□□□ -1.67
MRE11P49959 SSXP10-201ENST00000402595 565 ntBASIC4.61□□□□□ -1.67
MRE11P49959 AL122016.1-201ENST00000403365 367 ntBASIC4.61□□□□□ -1.67
MRE11P49959 RN7SKP32-201ENST00000410167 303 ntBASIC4.61□□□□□ -1.67
MRE11P49959 AL353678.1-201ENST00000422735 741 ntBASIC4.61□□□□□ -1.67
MRE11P49959 PSMA6P3-201ENST00000428242 164 ntBASIC4.61□□□□□ -1.67
MRE11P49959 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.61□□□□□ -1.67
MRE11P49959 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 AC108734.1-201ENST00000439549 399 ntBASIC4.61□□□□□ -1.67
MRE11P49959 MRPL50P4-201ENST00000446432 475 ntBASIC4.61□□□□□ -1.67
MRE11P49959 RPL7P52-201ENST00000449200 742 ntBASIC4.61□□□□□ -1.67
MRE11P49959 PPIAP3-201ENST00000450588 505 ntBASIC4.61□□□□□ -1.67
MRE11P49959 snoU13.8-201ENST00000458890 104 ntBASIC4.61□□□□□ -1.67
MRE11P49959 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.61□□□□□ -1.67
MRE11P49959 RNU7-30P-201ENST00000516835 62 ntBASIC4.61□□□□□ -1.67
MRE11P49959 RNU6-410P-201ENST00000517006 107 ntBASIC4.61□□□□□ -1.67
MRE11P49959 PTP4A1P6-201ENST00000531034 478 ntBASIC4.61□□□□□ -1.67
MRE11P49959 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.61□□□□□ -1.67
MRE11P49959 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 AC243960.4-201ENST00000600532 288 ntBASIC4.61□□□□□ -1.67
MRE11P49959 AC068790.3-201ENST00000602988 553 ntBASIC4.61□□□□□ -1.67
MRE11P49959 LLPHP1-201ENST00000603571 367 ntBASIC4.61□□□□□ -1.67
MRE11P49959 MIR8059-201ENST00000620427 81 ntBASIC4.61□□□□□ -1.67
MRE11P49959 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.61□□□□□ -1.67
MRE11P49959 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.61□□□□□ -1.67
MRE11P49959 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
MRE11P49959 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
MRE11P49959 FAM91A3P-201ENST00000456826 2544 ntBASIC4.61□□□□□ -1.67
MRE11P49959 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
MRE11P49959 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.6□□□□□ -1.67
MRE11P49959 NACAP2-201ENST00000318548 624 ntBASIC4.6□□□□□ -1.67
MRE11P49959 RNA5SP124-201ENST00000362739 110 ntBASIC4.6□□□□□ -1.67
MRE11P49959 RNU6-97P-201ENST00000363387 104 ntBASIC4.6□□□□□ -1.67
MRE11P49959 Y_RNA.255-201ENST00000364581 97 ntBASIC4.6□□□□□ -1.67
MRE11P49959 Y_RNA.394-201ENST00000383942 103 ntBASIC4.6□□□□□ -1.67
MRE11P49959 U3.20-201ENST00000390909 217 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AL136116.1-201ENST00000403591 381 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.6□□□□□ -1.67
MRE11P49959 RPS12P23-201ENST00000419579 400 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC137499.1-201ENST00000427602 88 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC005534.2-201ENST00000431047 433 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AC233279.1-201ENST00000455300 423 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AL356010.1-201ENST00000456364 102 ntBASIC4.6□□□□□ -1.67
MRE11P49959 AL049873.1-201ENST00000480540 376 ntBASIC4.6□□□□□ -1.67
MRE11P49959 RPL38P4-201ENST00000502376 214 ntBASIC4.6□□□□□ -1.67
MRE11P49959 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.6□□□□□ -1.67
MRE11P49959 AC110792.2-201ENST00000510278 224 ntBASIC4.6□□□□□ -1.67
MRE11P49959 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms