Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RNU6-1316P-201ENST00000384242 108 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HNF4AP41235 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 AC083875.1-201ENST00000419509 405 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 MTCO2P34-201ENST00000421994 607 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.23□□□□□ -1.89
HNF4AP41235 YME1L1P1-201ENST00000429435 297 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HNF4AP41235 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.23□□□□□ -1.89
HNF4AP41235 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 USP9YP29-201ENST00000445112 563 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 BMI1P1-201ENST00000445879 941 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HNF4AP41235 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.23□□□□□ -1.89
HNF4AP41235 MTCO1P27-201ENST00000448269 226 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 SNRPGP9-201ENST00000456025 225 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.23□□□□□ -1.89
HNF4AP41235 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HNF4AP41235 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.23□□□□□ -1.89
HNF4AP41235 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.23□□□□□ -1.89
HNF4AP41235 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HNF4AP41235 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.23□□□□□ -1.89
HNF4AP41235 AP003033.1-201ENST00000527244 415 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AP002748.2-201ENST00000528671 348 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.23□□□□□ -1.89
HNF4AP41235 PCMTD1P2-201ENST00000565017 355 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.23□□□□□ -1.89
HNF4AP41235 AP001004.1-201ENST00000582468 324 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.23□□□□□ -1.89
HNF4AP41235 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.23□□□□□ -1.89
HNF4AP41235 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.23□□□□□ -1.89
HNF4AP41235 AC012065.4-201ENST00000602445 679 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC009509.4-201ENST00000619202 509 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC092656.1-203ENST00000624134 423 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC079597.1-201ENST00000624306 508 ntBASIC3.23□□□□□ -1.89
HNF4AP41235 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.23□□□□□ -1.89
HNF4AP41235 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
HNF4AP41235 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
HNF4AP41235 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
HNF4AP41235 RNA5SP383-201ENST00000362934 120 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 RNU6-501P-201ENST00000364072 100 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 RNU6-270P-201ENST00000364131 105 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HNF4AP41235 RNU6-114P-201ENST00000384704 105 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 MTCYBP36-201ENST00000404146 440 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HNF4AP41235 RNU6-516P-201ENST00000411381 104 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 MTND1P21-201ENST00000412991 285 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.22□□□□□ -1.89
HNF4AP41235 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.22□□□□□ -1.89
HNF4AP41235 BX890604.2-201ENST00000427883 474 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.22□□□□□ -1.89
HNF4AP41235 UBE2V1P13-201ENST00000436983 439 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HNF4AP41235 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 RNU6-956P-201ENST00000458868 103 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HNF4AP41235 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HNF4AP41235 RNA5SP216-201ENST00000516111 123 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 SNORA64.4-201ENST00000516632 81 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 DUXAP2-201ENST00000519198 589 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.22□□□□□ -1.89
HNF4AP41235 AC011611.1-201ENST00000552179 197 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
HNF4AP41235 AGGF1P4-201ENST00000568249 801 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.22□□□□□ -1.89
HNF4AP41235 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.22□□□□□ -1.89
HNF4AP41235 AC020895.1-201ENST00000595362 272 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.22□□□□□ -1.89
HNF4AP41235 MIR92B-201ENST00000607575 96 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC097468.3-201ENST00000607956 456 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC103710.4-201ENST00000609301 899 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC012360.2-201ENST00000609349 391 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AL355365.1-201ENST00000616480 294 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC012314.7-201ENST00000619693 93 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 AC073476.4-201ENST00000628409 72 ntBASIC3.22□□□□□ -1.89
HNF4AP41235 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.22□□□□□ -1.89
HNF4AP41235 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.22□□□□□ -1.89
HNF4AP41235 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.22□□□□□ -1.89
HNF4AP41235 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.21□□□□□ -1.89
HNF4AP41235 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
HNF4AP41235 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.21□□□□□ -1.9
HNF4AP41235 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
HNF4AP41235 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HNF4AP41235 RNU1-105P-201ENST00000363470 161 ntBASIC3.21□□□□□ -1.9
HNF4AP41235 RNU6-289P-201ENST00000364093 107 ntBASIC3.21□□□□□ -1.9
HNF4AP41235 SNORA23-201ENST00000365128 182 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms