Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBRP36941 SNORA14.1-201ENST00000516113 141 ntBASIC4.48□□□□□ -1.69
LTBRP36941 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.48□□□□□ -1.69
LTBRP36941 ERHP1-201ENST00000523006 310 ntBASIC4.48□□□□□ -1.69
LTBRP36941 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.48□□□□□ -1.69
LTBRP36941 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.48□□□□□ -1.69
LTBRP36941 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.48□□□□□ -1.69
LTBRP36941 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.48□□□□□ -1.69
LTBRP36941 MIR3200-201ENST00000580767 85 ntBASIC4.48□□□□□ -1.69
LTBRP36941 MIR5690-201ENST00000583739 73 ntBASIC4.48□□□□□ -1.69
LTBRP36941 MIR5692C1-201ENST00000585309 91 ntBASIC4.48□□□□□ -1.69
LTBRP36941 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.48□□□□□ -1.69
LTBRP36941 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.48□□□□□ -1.69
LTBRP36941 AL355802.3-201ENST00000607571 545 ntBASIC4.48□□□□□ -1.69
LTBRP36941 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.48□□□□□ -1.69
LTBRP36941 AL138726.1-201ENST00000614873 333 ntBASIC4.48□□□□□ -1.69
LTBRP36941 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBRP36941 AC244517.12-201ENST00000623581 663 ntBASIC4.48□□□□□ -1.69
LTBRP36941 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
LTBRP36941 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.48□□□□□ -1.69
LTBRP36941 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.48□□□□□ -1.69
LTBRP36941 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LTBRP36941 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
LTBRP36941 HSPA8P4-201ENST00000511877 1920 ntBASIC4.48□□□□□ -1.69
LTBRP36941 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
LTBRP36941 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBRP36941 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBRP36941 MAPK10-349ENST00000641767 3661 ntBASIC4.48□□□□□ -1.69
LTBRP36941 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LTBRP36941 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.47□□□□□ -1.69
LTBRP36941 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
LTBRP36941 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.47□□□□□ -1.69
LTBRP36941 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
LTBRP36941 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 AC016588.2-201ENST00000632484 3021 ntBASIC4.47□□□□□ -1.69
LTBRP36941 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
LTBRP36941 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.47□□□□□ -1.69
LTBRP36941 RNU1-20P-201ENST00000363314 162 ntBASIC4.47□□□□□ -1.69
LTBRP36941 RNU6-1188P-201ENST00000363795 107 ntBASIC4.47□□□□□ -1.69
LTBRP36941 Y_RNA.197-201ENST00000364004 102 ntBASIC4.47□□□□□ -1.69
LTBRP36941 SNORA63C-201ENST00000364578 129 ntBASIC4.47□□□□□ -1.69
LTBRP36941 SNORA33.2-201ENST00000365413 134 ntBASIC4.47□□□□□ -1.69
LTBRP36941 Y_RNA.482-201ENST00000384377 111 ntBASIC4.47□□□□□ -1.69
LTBRP36941 RNU6-601P-201ENST00000384540 107 ntBASIC4.47□□□□□ -1.69
LTBRP36941 RNU6-1160P-201ENST00000384546 104 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AL360182.1-201ENST00000397433 468 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AL590704.1-201ENST00000402856 794 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AL139397.2-201ENST00000404529 772 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AC079809.1-201ENST00000415468 276 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.47□□□□□ -1.69
LTBRP36941 RPL21P109-201ENST00000422213 475 ntBASIC4.47□□□□□ -1.69
LTBRP36941 NOTCH2P1-201ENST00000443481 624 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.47□□□□□ -1.69
LTBRP36941 RPL30P15-201ENST00000457129 321 ntBASIC4.47□□□□□ -1.69
LTBRP36941 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.47□□□□□ -1.69
LTBRP36941 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.47□□□□□ -1.69
LTBRP36941 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.47□□□□□ -1.69
LTBRP36941 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.47□□□□□ -1.69
LTBRP36941 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.47□□□□□ -1.69
LTBRP36941 AC005951.2-201ENST00000576282 495 ntBASIC4.47□□□□□ -1.69
LTBRP36941 SNORD84-203ENST00000584275 78 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.47□□□□□ -1.69
LTBRP36941 CYP2C61P-201ENST00000604072 290 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AL355365.1-201ENST00000616480 294 ntBASIC4.47□□□□□ -1.69
LTBRP36941 AC131238.1-201ENST00000617135 328 ntBASIC4.47□□□□□ -1.69
LTBRP36941 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.47□□□□□ -1.69
LTBRP36941 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
LTBRP36941 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.46□□□□□ -1.69
LTBRP36941 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.69
LTBRP36941 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
LTBRP36941 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
LTBRP36941 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.46□□□□□ -1.7
LTBRP36941 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
LTBRP36941 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.46□□□□□ -1.7
LTBRP36941 RNU6-562P-201ENST00000362731 107 ntBASIC4.46□□□□□ -1.7
LTBRP36941 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
LTBRP36941 Y_RNA.395-201ENST00000383945 109 ntBASIC4.46□□□□□ -1.7
LTBRP36941 RNU6-817P-201ENST00000391083 104 ntBASIC4.46□□□□□ -1.7
LTBRP36941 RPS4XP7-201ENST00000406274 780 ntBASIC4.46□□□□□ -1.7
LTBRP36941 HSPE1P8-201ENST00000406997 288 ntBASIC4.46□□□□□ -1.7
LTBRP36941 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBRP36941 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBRP36941 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.46□□□□□ -1.7
LTBRP36941 SNAP23P1-201ENST00000433229 246 ntBASIC4.46□□□□□ -1.7
LTBRP36941 AL591212.2-201ENST00000433923 257 ntBASIC4.46□□□□□ -1.7
LTBRP36941 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
LTBRP36941 BTF3P6-201ENST00000448054 499 ntBASIC4.46□□□□□ -1.7
LTBRP36941 RPL23AP81-201ENST00000455252 467 ntBASIC4.46□□□□□ -1.7
LTBRP36941 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBRP36941 AC104472.2-201ENST00000469035 601 ntBASIC4.46□□□□□ -1.7
LTBRP36941 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.46□□□□□ -1.7
LTBRP36941 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
LTBRP36941 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms