Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT9P35527 MAPK10-322ENST00000641485 4530 ntBASIC3.65□□□□□ -1.83
KRT9P35527 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
KRT9P35527 MTND4P5-201ENST00000435821 1374 ntBASIC3.64□□□□□ -1.83
KRT9P35527 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRT9P35527 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT9P35527 AC092104.1-201ENST00000497346 1441 ntBASIC3.64□□□□□ -1.83
KRT9P35527 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT9P35527 RNY4P16-201ENST00000364768 94 ntBASIC3.64□□□□□ -1.83
KRT9P35527 RNY3P13-201ENST00000365542 102 ntBASIC3.64□□□□□ -1.83
KRT9P35527 RNU1-101P-201ENST00000391171 127 ntBASIC3.64□□□□□ -1.83
KRT9P35527 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT9P35527 FCF1P10-201ENST00000407590 479 ntBASIC3.64□□□□□ -1.83
KRT9P35527 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT9P35527 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT9P35527 RPS29P4-201ENST00000414733 161 ntBASIC3.64□□□□□ -1.83
KRT9P35527 ATP5JP1-201ENST00000431631 322 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT9P35527 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT9P35527 RPS27AP8-201ENST00000452665 445 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT9P35527 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.64□□□□□ -1.83
KRT9P35527 AC116337.2-201ENST00000477662 156 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC092185.1-201ENST00000491371 97 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT9P35527 RNU6-1282P-201ENST00000516735 96 ntBASIC3.64□□□□□ -1.83
KRT9P35527 SCARNA20.6-201ENST00000517251 106 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC060788.1-201ENST00000521318 469 ntBASIC3.64□□□□□ -1.83
KRT9P35527 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
KRT9P35527 OR5B10P-201ENST00000532869 642 ntBASIC3.64□□□□□ -1.83
KRT9P35527 HMGB1P14-201ENST00000557424 591 ntBASIC3.64□□□□□ -1.83
KRT9P35527 TRAV28-201ENST00000557548 323 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AL157394.1-201ENST00000562983 1224 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC037471.2-201ENST00000564941 598 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT9P35527 MIR3118-1-201ENST00000581787 76 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC008277.2-201ENST00000605196 797 ntBASIC3.64□□□□□ -1.83
KRT9P35527 BX664608.1-201ENST00000610519 487 ntBASIC3.64□□□□□ -1.83
KRT9P35527 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT9P35527 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.64□□□□□ -1.83
KRT9P35527 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC009878.1-201ENST00000621819 340 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC091953.2-201ENST00000623979 160 ntBASIC3.64□□□□□ -1.83
KRT9P35527 SNORA50A-202ENST00000629536 136 ntBASIC3.64□□□□□ -1.83
KRT9P35527 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.64□□□□□ -1.83
KRT9P35527 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT9P35527 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
KRT9P35527 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
KRT9P35527 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
KRT9P35527 SRP72P2-201ENST00000344851 1979 ntBASIC3.63□□□□□ -1.83
KRT9P35527 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 MIR208A-201ENST00000362287 71 ntBASIC3.63□□□□□ -1.83
KRT9P35527 RNU6-1284P-201ENST00000363701 100 ntBASIC3.63□□□□□ -1.83
KRT9P35527 SNORA70.4-201ENST00000365509 134 ntBASIC3.63□□□□□ -1.83
KRT9P35527 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 MIR200C-201ENST00000384980 68 ntBASIC3.63□□□□□ -1.83
KRT9P35527 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
KRT9P35527 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
KRT9P35527 RNU2-62P-201ENST00000410868 191 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT9P35527 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT9P35527 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRT9P35527 AC012498.1-201ENST00000424037 437 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AC244035.1-201ENST00000430042 390 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 Z82210.1-201ENST00000440037 231 ntBASIC3.63□□□□□ -1.83
KRT9P35527 PIGFP3-201ENST00000441918 722 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AC016696.1-201ENST00000446949 318 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT9P35527 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRT9P35527 RBMY2UP-201ENST00000453474 324 ntBASIC3.63□□□□□ -1.83
KRT9P35527 KCTD9P5-201ENST00000504141 1170 ntBASIC3.63□□□□□ -1.83
KRT9P35527 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT9P35527 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.63□□□□□ -1.83
KRT9P35527 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
KRT9P35527 FCF1P8-201ENST00000510322 597 ntBASIC3.63□□□□□ -1.83
KRT9P35527 RNU1-143P-201ENST00000516296 146 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AC068657.1-201ENST00000520807 306 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AC022878.1-201ENST00000530684 149 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.63□□□□□ -1.83
KRT9P35527 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.63□□□□□ -1.83
KRT9P35527 TRAV37-201ENST00000553906 342 ntBASIC3.63□□□□□ -1.83
KRT9P35527 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.63□□□□□ -1.83
KRT9P35527 AMZ2P1-203ENST00000565833 850 ntBASIC3.63□□□□□ -1.83
KRT9P35527 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
KRT9P35527 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 NBR2-204ENST00000587322 63 ntBASIC3.63□□□□□ -1.83
KRT9P35527 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 DPPA3P3-201ENST00000603842 430 ntBASIC3.63□□□□□ -1.83
KRT9P35527 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.63□□□□□ -1.83
KRT9P35527 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.63□□□□□ -1.83
KRT9P35527 U1.23-201ENST00000610293 146 ntBASIC3.63□□□□□ -1.83
KRT9P35527 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.63□□□□□ -1.83
KRT9P35527 RNU1-68P-201ENST00000615382 146 ntBASIC3.63□□□□□ -1.83
KRT9P35527 U1.39-201ENST00000621562 146 ntBASIC3.63□□□□□ -1.83
KRT9P35527 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms