Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXD13P35453 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC110794.1-201ENST00000505816 425 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC022616.6-201ENST00000520479 119 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 IGHV3-76-201ENST00000522465 295 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 MTCO1P47-201ENST00000523889 1271 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AP000867.2-201ENST00000532468 320 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 MIR3915-201ENST00000578518 97 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXD13P35453 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 AC004696.1-201ENST00000614345 607 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AC138932.5-201ENST00000617759 563 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 AC073308.1-201ENST00000623696 305 ntBASIC3.45□□□□□ -1.86
HOXD13P35453 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXD13P35453 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD13P35453 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HOXD13P35453 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXD13P35453 MAPK10-362ENST00000641864 4484 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HOXD13P35453 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD13P35453 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
HOXD13P35453 MIR208A-201ENST00000362287 71 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 RNA5SP72-201ENST00000364442 117 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 RNA5SP252-201ENST00000391131 119 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 MRPL42P2-201ENST00000403169 426 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 FCF1P10-201ENST00000407590 479 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AC245291.1-201ENST00000419501 328 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD13P35453 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD13P35453 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD13P35453 AC093156.1-201ENST00000440382 670 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 GAPDHP27-201ENST00000447427 1020 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD13P35453 USP9YP12-201ENST00000450481 570 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXD13P35453 RN7SL863P-201ENST00000462370 296 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 RPS27P29-201ENST00000463110 252 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AC104472.2-201ENST00000469035 601 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AC116337.2-201ENST00000477662 156 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AL160314.1-201ENST00000490836 438 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD13P35453 RNA5SP217-201ENST00000515959 91 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 RNU6-927P-201ENST00000516199 100 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD13P35453 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD13P35453 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD13P35453 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD13P35453 AC123904.2-201ENST00000548059 300 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 DNAJC8P1-201ENST00000554535 372 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.44□□□□□ -1.86
HOXD13P35453 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
HOXD13P35453 AMZ2P1-203ENST00000565833 850 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AC135628.1-201ENST00000568867 534 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 GLUD1P4-201ENST00000590914 418 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AF131215.7-201ENST00000602443 707 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 SRGNP1-201ENST00000603392 451 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AL022161.1-201ENST00000604390 213 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 AC105129.3-201ENST00000605455 485 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 uc_338.12-201ENST00000616344 181 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 SNORA50A-202ENST00000629536 136 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 MTND1P37-201ENST00000636562 264 ntBASIC3.44□□□□□ -1.86
HOXD13P35453 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.44□□□□□ -1.86
HOXD13P35453 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.44□□□□□ -1.86
HOXD13P35453 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HOXD13P35453 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD13P35453 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD13P35453 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD13P35453 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.43□□□□□ -1.86
HOXD13P35453 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD13P35453 MTND4P4-201ENST00000439033 1366 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD13P35453 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD13P35453 U3.6-201ENST00000363622 211 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 RNY3P13-201ENST00000365542 102 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HOXD13P35453 SNORA54-201ENST00000384281 123 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 RNY3P9-201ENST00000384727 106 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 Y_RNA.608-201ENST00000410647 95 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 RNU4-47P-201ENST00000410876 114 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 MRPL50P2-201ENST00000416821 482 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD13P35453 UBE2D3P4-201ENST00000441973 436 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD13P35453 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.43□□□□□ -1.86
HOXD13P35453 AC010099.1-201ENST00000455434 375 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC034236.1-201ENST00000469891 373 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 RPL7P49-201ENST00000471402 708 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 KC877373.1-201ENST00000479066 408 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.43□□□□□ -1.86
HOXD13P35453 AC109486.1-201ENST00000486833 374 ntBASIC3.43□□□□□ -1.86
HOXD13P35453 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms