Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MTND1P31-201ENST00000449206 961 ntBASIC2.54□□□□□ -2
RORAP35398 AC005410.1-202ENST00000460347 485 ntBASIC2.54□□□□□ -2
RORAP35398 RPL30P9-201ENST00000465586 330 ntBASIC2.54□□□□□ -2
RORAP35398 AP000852.1-201ENST00000472460 573 ntBASIC2.54□□□□□ -2
RORAP35398 HMGB1P36-201ENST00000487709 576 ntBASIC2.54□□□□□ -2
RORAP35398 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC2.54□□□□□ -2
RORAP35398 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.54□□□□□ -2
RORAP35398 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RORAP35398 AC114781.4-201ENST00000513707 639 ntBASIC2.54□□□□□ -2
RORAP35398 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.54□□□□□ -2
RORAP35398 RNU6-798P-201ENST00000516912 103 ntBASIC2.54□□□□□ -2
RORAP35398 RNU6-714P-201ENST00000516963 103 ntBASIC2.54□□□□□ -2
RORAP35398 AP000857.1-201ENST00000532151 543 ntBASIC2.54□□□□□ -2
RORAP35398 MTCYBP23-201ENST00000558717 1102 ntBASIC2.54□□□□□ -2
RORAP35398 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.54□□□□□ -2
RORAP35398 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.54□□□□□ -2
RORAP35398 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.54□□□□□ -2
RORAP35398 OR4K7P-201ENST00000580232 945 ntBASIC2.54□□□□□ -2
RORAP35398 AP001269.3-201ENST00000588718 329 ntBASIC2.54□□□□□ -2
RORAP35398 AC005498.1-201ENST00000592125 465 ntBASIC2.54□□□□□ -2
RORAP35398 BBIP1P1-201ENST00000602999 279 ntBASIC2.54□□□□□ -2
RORAP35398 RNU4-5P-201ENST00000607255 135 ntBASIC2.54□□□□□ -2
RORAP35398 AL157392.4-201ENST00000609756 345 ntBASIC2.54□□□□□ -2
RORAP35398 AL109620.1-201ENST00000618738 1197 ntBASIC2.54□□□□□ -2
RORAP35398 AC006386.1-201ENST00000619436 415 ntBASIC2.54□□□□□ -2
RORAP35398 AC022306.3-201ENST00000619930 550 ntBASIC2.54□□□□□ -2
RORAP35398 AC116618.1-201ENST00000634617 774 ntBASIC2.54□□□□□ -2
RORAP35398 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.54□□□□□ -2
RORAP35398 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RORAP35398 AL390862.1-201ENST00000635467 1469 ntBASIC2.53□□□□□ -2
RORAP35398 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
RORAP35398 RNA5SP126-201ENST00000365092 109 ntBASIC2.53□□□□□ -2
RORAP35398 MIR592-201ENST00000384959 97 ntBASIC2.53□□□□□ -2
RORAP35398 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.53□□□□□ -2
RORAP35398 AL513175.2-201ENST00000422071 443 ntBASIC2.53□□□□□ -2
RORAP35398 PPP1R11P2-201ENST00000423543 382 ntBASIC2.53□□□□□ -2
RORAP35398 AL358075.3-201ENST00000426289 226 ntBASIC2.53□□□□□ -2
RORAP35398 AC009414.1-201ENST00000427200 443 ntBASIC2.53□□□□□ -2
RORAP35398 AL356867.1-201ENST00000429623 299 ntBASIC2.53□□□□□ -2
RORAP35398 ATP5F1P1-201ENST00000433775 569 ntBASIC2.53□□□□□ -2
RORAP35398 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.53□□□□□ -2
RORAP35398 AL031313.1-201ENST00000448435 256 ntBASIC2.53□□□□□ -2
RORAP35398 RPS15AP27-201ENST00000449183 343 ntBASIC2.53□□□□□ -2
RORAP35398 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.53□□□□□ -2
RORAP35398 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.53□□□□□ -2
RORAP35398 RPL21P134-201ENST00000453468 483 ntBASIC2.53□□□□□ -2
RORAP35398 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.53□□□□□ -2
RORAP35398 SNORD121B-201ENST00000458838 81 ntBASIC2.53□□□□□ -2
RORAP35398 HSPE1P6-201ENST00000479457 291 ntBASIC2.53□□□□□ -2
RORAP35398 RN7SL297P-201ENST00000483161 293 ntBASIC2.53□□□□□ -2
RORAP35398 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.53□□□□□ -2
RORAP35398 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.53□□□□□ -2
RORAP35398 CDC42P4-201ENST00000510507 563 ntBASIC2.53□□□□□ -2
RORAP35398 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.53□□□□□ -2
RORAP35398 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.53□□□□□ -2
RORAP35398 AC096725.1-201ENST00000514266 313 ntBASIC2.53□□□□□ -2
RORAP35398 RNU6-150P-201ENST00000516237 95 ntBASIC2.53□□□□□ -2
RORAP35398 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
RORAP35398 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.53□□□□□ -2
RORAP35398 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.53□□□□□ -2
RORAP35398 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.53□□□□□ -2
RORAP35398 AP003497.1-201ENST00000528472 562 ntBASIC2.53□□□□□ -2
RORAP35398 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.53□□□□□ -2
RORAP35398 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.53□□□□□ -2
RORAP35398 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
RORAP35398 AC004987.4-201ENST00000603383 338 ntBASIC2.53□□□□□ -2
RORAP35398 AC005046.1-201ENST00000608515 625 ntBASIC2.53□□□□□ -2
RORAP35398 AC008443.7-201ENST00000622195 246 ntBASIC2.53□□□□□ -2
RORAP35398 AC092608.2-201ENST00000624427 218 ntBASIC2.53□□□□□ -2
RORAP35398 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.53□□□□□ -2
RORAP35398 AC243829.7-201ENST00000633081 225 ntBASIC2.53□□□□□ -2
RORAP35398 AC099654.9-201ENST00000637055 678 ntBASIC2.53□□□□□ -2
RORAP35398 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.53□□□□□ -2
RORAP35398 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.52□□□□□ -2.01
RORAP35398 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
RORAP35398 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RORAP35398 AC011477.1-204ENST00000623416 1325 ntBASIC2.52□□□□□ -2.01
RORAP35398 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RORAP35398 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RORAP35398 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RORAP35398 RNA5SP68-201ENST00000363885 119 ntBASIC2.52□□□□□ -2.01
RORAP35398 RNU6-777P-201ENST00000364265 104 ntBASIC2.52□□□□□ -2.01
RORAP35398 Y_RNA.311-201ENST00000365068 96 ntBASIC2.52□□□□□ -2.01
RORAP35398 SNORA36C-201ENST00000384289 132 ntBASIC2.52□□□□□ -2.01
RORAP35398 AL139039.1-201ENST00000401900 692 ntBASIC2.52□□□□□ -2.01
RORAP35398 AL953862.1-201ENST00000423016 168 ntBASIC2.52□□□□□ -2.01
RORAP35398 MTCO2P20-201ENST00000437339 673 ntBASIC2.52□□□□□ -2.01
RORAP35398 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.52□□□□□ -2.01
RORAP35398 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.52□□□□□ -2.01
RORAP35398 EEF1E1P1-201ENST00000446998 430 ntBASIC2.52□□□□□ -2.01
RORAP35398 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RORAP35398 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.52□□□□□ -2.01
RORAP35398 FAM172BP-201ENST00000487497 1089 ntBASIC2.52□□□□□ -2.01
RORAP35398 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.52□□□□□ -2.01
RORAP35398 COX6CP5-201ENST00000527162 228 ntBASIC2.52□□□□□ -2.01
RORAP35398 OR6C7P-201ENST00000547875 934 ntBASIC2.52□□□□□ -2.01
RORAP35398 AC009163.5-201ENST00000575421 637 ntBASIC2.52□□□□□ -2.01
RORAP35398 AC090616.3-201ENST00000582184 217 ntBASIC2.52□□□□□ -2.01
RORAP35398 AL353997.4-201ENST00000586196 166 ntBASIC2.52□□□□□ -2.01
RORAP35398 OR1M4P-201ENST00000589199 287 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms