Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
GPC1P35052 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC1P35052 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC1P35052 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
GPC1P35052 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC1P35052 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC1P35052 Y_RNA.33-201ENST00000362591 102 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-1249P-201ENST00000363237 111 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-923P-201ENST00000364753 107 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNA5SP131-201ENST00000365452 119 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RN7SKP269-201ENST00000365545 319 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-395P-201ENST00000365662 106 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-76P-201ENST00000384060 104 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-417P-201ENST00000384712 107 ntBASIC5.2□□□□□ -1.58
GPC1P35052 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-712P-201ENST00000410558 100 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RNU6-394P-201ENST00000410735 107 ntBASIC5.2□□□□□ -1.58
GPC1P35052 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC1P35052 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC1P35052 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 RPS6P12-201ENST00000432491 726 ntBASIC5.2□□□□□ -1.58
GPC1P35052 AZGP1P2-201ENST00000454506 345 ntBASIC5.2□□□□□ -1.58
GPC1P35052 TOMM22P6-201ENST00000465035 409 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RPL23AP65-201ENST00000475608 468 ntBASIC5.2□□□□□ -1.58
GPC1P35052 RN7SL799P-201ENST00000475891 298 ntBASIC5.2□□□□□ -1.58
GPC1P35052 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC1P35052 RNU2-31P-201ENST00000516954 155 ntBASIC5.2□□□□□ -1.58
GPC1P35052 SNORA31.22-201ENST00000517204 135 ntBASIC5.2□□□□□ -1.58
GPC1P35052 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC1P35052 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.2□□□□□ -1.58
GPC1P35052 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC1P35052 MRPS21P7-201ENST00000566937 238 ntBASIC5.2□□□□□ -1.58
GPC1P35052 MIR4660-201ENST00000583549 74 ntBASIC5.2□□□□□ -1.58
GPC1P35052 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.2□□□□□ -1.58
GPC1P35052 AC025574.2-201ENST00000615621 514 ntBASIC5.2□□□□□ -1.58
GPC1P35052 uc_338.7-201ENST00000621834 124 ntBASIC5.2□□□□□ -1.58
GPC1P35052 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC1P35052 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
GPC1P35052 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
GPC1P35052 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
GPC1P35052 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.2□□□□□ -1.58
GPC1P35052 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
GPC1P35052 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
GPC1P35052 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
GPC1P35052 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.19□□□□□ -1.58
GPC1P35052 Y_RNA.123-201ENST00000363338 102 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RNU6-384P-201ENST00000364900 104 ntBASIC5.19□□□□□ -1.58
GPC1P35052 Y_RNA.504-201ENST00000384481 104 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RNU6-1154P-201ENST00000391001 104 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RNU2-61P-201ENST00000411069 191 ntBASIC5.19□□□□□ -1.58
GPC1P35052 GPS2P1-201ENST00000411761 986 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RPS27AP12-201ENST00000429552 465 ntBASIC5.19□□□□□ -1.58
GPC1P35052 NDUFB4P8-201ENST00000435351 367 ntBASIC5.19□□□□□ -1.58
GPC1P35052 EEF1B2P6-201ENST00000445713 673 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RPL37P6-202ENST00000464216 403 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RN7SL189P-201ENST00000468631 289 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RPL23AP45-201ENST00000476406 468 ntBASIC5.19□□□□□ -1.58
GPC1P35052 AC007686.1-201ENST00000488511 463 ntBASIC5.19□□□□□ -1.58
GPC1P35052 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.19□□□□□ -1.58
GPC1P35052 RNA5SP471-201ENST00000516971 106 ntBASIC5.19□□□□□ -1.58
GPC1P35052 RNA5SP230-201ENST00000517039 122 ntBASIC5.19□□□□□ -1.58
GPC1P35052 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.19□□□□□ -1.58
GPC1P35052 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.19□□□□□ -1.58
GPC1P35052 AL049872.1-201ENST00000556323 322 ntBASIC5.19□□□□□ -1.58
GPC1P35052 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
GPC1P35052 H3F3AP1-201ENST00000559984 334 ntBASIC5.19□□□□□ -1.58
GPC1P35052 AP005403.1-201ENST00000579720 229 ntBASIC5.19□□□□□ -1.58
GPC1P35052 AL355480.1-201ENST00000629041 99 ntBASIC5.19□□□□□ -1.58
GPC1P35052 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
GPC1P35052 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC1P35052 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
GPC1P35052 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.18□□□□□ -1.58
GPC1P35052 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GPC1P35052 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GPC1P35052 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
GPC1P35052 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
GPC1P35052 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC1P35052 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
GPC1P35052 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
GPC1P35052 RNA5SP510-201ENST00000364697 99 ntBASIC5.18□□□□□ -1.58
GPC1P35052 RNU6-326P-201ENST00000365480 107 ntBASIC5.18□□□□□ -1.58
GPC1P35052 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GPC1P35052 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
GPC1P35052 RN7SKP114-201ENST00000410327 279 ntBASIC5.18□□□□□ -1.58
GPC1P35052 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.18□□□□□ -1.58
GPC1P35052 AL133173.1-201ENST00000423458 397 ntBASIC5.18□□□□□ -1.58
GPC1P35052 AL662874.1-201ENST00000426065 230 ntBASIC5.18□□□□□ -1.58
GPC1P35052 TOMM20P4-201ENST00000427861 435 ntBASIC5.18□□□□□ -1.58
GPC1P35052 GEMIN8P3-201ENST00000445417 720 ntBASIC5.18□□□□□ -1.58
GPC1P35052 HIGD1AP2-201ENST00000446367 280 ntBASIC5.18□□□□□ -1.58
GPC1P35052 AC023141.9-201ENST00000458734 412 ntBASIC5.18□□□□□ -1.58
GPC1P35052 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC5.18□□□□□ -1.58
GPC1P35052 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms