Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 MIR3935-201ENST00000583472 104 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AC136443.5-201ENST00000603741 370 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A5P29400 AL590396.2-201ENST00000636511 1041 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A5P29400 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A5P29400 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A5P29400 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.8□□□□□ -2.12
COL4A5P29400 MTND4P8-201ENST00000514997 1362 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 MTCO1P4-201ENST00000520516 1409 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 RNU6-799P-201ENST00000363567 107 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 RNU6-173P-201ENST00000364215 104 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 RNU6-1226P-201ENST00000384317 107 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 MTCO3P12-201ENST00000416718 547 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 HSPE1P1-201ENST00000421494 318 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AL590623.1-201ENST00000427864 105 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 ZNF965P-201ENST00000432501 817 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC010285.1-201ENST00000470580 392 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC087879.1-201ENST00000474343 374 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 RPS29P20-201ENST00000489592 171 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
COL4A5P29400 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC105914.1-201ENST00000511798 226 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC083923.1-201ENST00000523708 376 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC025918.2-201ENST00000558683 763 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 MIR4446-201ENST00000578505 67 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 OR4K8P-201ENST00000578842 1048 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 AC008962.1-201ENST00000605729 304 ntBASIC1.8□□□□□ -2.12
COL4A5P29400 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.8□□□□□ -2.12
COL4A5P29400 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
COL4A5P29400 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A5P29400 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
COL4A5P29400 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
COL4A5P29400 AC073055.1-201ENST00000456901 1621 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 Y_RNA.30-201ENST00000362572 97 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 MIR598-201ENST00000384868 97 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 RNU6-1077P-201ENST00000410506 102 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A5P29400 AL513185.2-201ENST00000425543 193 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC109583.1-201ENST00000432156 268 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AL031659.1-201ENST00000447075 539 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.79□□□□□ -2.12
COL4A5P29400 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A5P29400 SNORA31.20-201ENST00000517111 133 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A5P29400 ERHP1-201ENST00000523006 310 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 HAUS1P3-201ENST00000523909 662 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 OR8K4P-201ENST00000534608 872 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A5P29400 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A5P29400 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A5P29400 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A5P29400 AC008687.2-201ENST00000597865 520 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC080078.3-201ENST00000605407 463 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC004775.1-201ENST00000607389 753 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC068944.2-201ENST00000610373 403 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AL390240.1-201ENST00000612950 384 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AL158801.5-201ENST00000623123 465 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 AC095031.1-201ENST00000623685 672 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 FO624990.1-201ENST00000636373 85 ntBASIC1.79□□□□□ -2.12
COL4A5P29400 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
COL4A5P29400 SEC63P2-201ENST00000503863 1939 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A5P29400 RNU6-263P-201ENST00000363811 107 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 RNA5SP139-201ENST00000364340 117 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 RNU1-93P-201ENST00000364704 169 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A5P29400 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A5P29400 AC074051.3-201ENST00000570238 358 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 GLUD1P4-201ENST00000590914 418 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 HSPE1P14-201ENST00000605812 302 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 AC018926.3-201ENST00000618841 406 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A5P29400 AL121594.5-201ENST00000631724 573 ntBASIC1.78□□□□□ -2.12
COL4A5P29400 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A5P29400 VTRNA1-1-201ENST00000363120 99 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 RNU1-22P-201ENST00000363334 158 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 RNU6-1339P-201ENST00000363574 91 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 SUMO2P12-201ENST00000405924 140 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC109780.2-201ENST00000413467 845 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC099677.1-201ENST00000420575 175 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A5P29400 RPS20P24-201ENST00000457473 361 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 HMGB1P22-201ENST00000505315 124 ntBASIC1.77□□□□□ -2.13
COL4A5P29400 AC006390.1-201ENST00000508068 283 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms