Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AL355375.2-201ENST00000574825 175 ntBASIC4.26□□□□□ -1.73
XPAP23025 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.26□□□□□ -1.73
XPAP23025 AL161729.3-201ENST00000603533 673 ntBASIC4.26□□□□□ -1.73
XPAP23025 CTHRC1P1-201ENST00000605383 469 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC016727.1-205ENST00000605437 569 ntBASIC4.26□□□□□ -1.73
XPAP23025 AC006023.2-201ENST00000609916 167 ntBASIC4.26□□□□□ -1.73
XPAP23025 AL390240.1-201ENST00000612950 384 ntBASIC4.26□□□□□ -1.73
XPAP23025 uc_338.34-201ENST00000617467 174 ntBASIC4.26□□□□□ -1.73
XPAP23025 FRG1KP-201ENST00000623592 341 ntBASIC4.26□□□□□ -1.73
XPAP23025 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.26□□□□□ -1.73
XPAP23025 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
XPAP23025 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
XPAP23025 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
XPAP23025 AP001350.1-201ENST00000601906 1524 ntBASIC4.26□□□□□ -1.73
XPAP23025 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XPAP23025 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
XPAP23025 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.25□□□□□ -1.73
XPAP23025 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
XPAP23025 AP004289.2-201ENST00000444413 1457 ntBASIC4.25□□□□□ -1.73
XPAP23025 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.25□□□□□ -1.73
XPAP23025 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XPAP23025 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.25□□□□□ -1.73
XPAP23025 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
XPAP23025 Y_RNA.167-201ENST00000363735 109 ntBASIC4.25□□□□□ -1.73
XPAP23025 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.25□□□□□ -1.73
XPAP23025 AC110754.1-201ENST00000399740 601 ntBASIC4.25□□□□□ -1.73
XPAP23025 NDUFS5P1-201ENST00000405668 289 ntBASIC4.25□□□□□ -1.73
XPAP23025 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 OR6C66P-201ENST00000414917 930 ntBASIC4.25□□□□□ -1.73
XPAP23025 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 RPL7P46-201ENST00000425129 740 ntBASIC4.25□□□□□ -1.73
XPAP23025 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
XPAP23025 RPL36AP6-201ENST00000435770 321 ntBASIC4.25□□□□□ -1.73
XPAP23025 PRPS1P1-201ENST00000445305 876 ntBASIC4.25□□□□□ -1.73
XPAP23025 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 AC079804.1-201ENST00000461922 436 ntBASIC4.25□□□□□ -1.73
XPAP23025 AC083904.1-201ENST00000487828 231 ntBASIC4.25□□□□□ -1.73
XPAP23025 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 AC117522.3-201ENST00000507974 584 ntBASIC4.25□□□□□ -1.73
XPAP23025 FAM206BP-201ENST00000510179 541 ntBASIC4.25□□□□□ -1.73
XPAP23025 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 SNORA31.22-201ENST00000517204 135 ntBASIC4.25□□□□□ -1.73
XPAP23025 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
XPAP23025 AL121603.1-201ENST00000553815 142 ntBASIC4.25□□□□□ -1.73
XPAP23025 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 AC008521.1-201ENST00000587471 187 ntBASIC4.25□□□□□ -1.73
XPAP23025 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.25□□□□□ -1.73
XPAP23025 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.25□□□□□ -1.73
XPAP23025 AL050343.2-201ENST00000607338 280 ntBASIC4.25□□□□□ -1.73
XPAP23025 MIR1302-1-201ENST00000637932 143 ntBASIC4.25□□□□□ -1.73
XPAP23025 MTND4P14-201ENST00000435799 1354 ntBASIC4.25□□□□□ -1.73
XPAP23025 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.25□□□□□ -1.73
XPAP23025 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.25□□□□□ -1.73
XPAP23025 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.25□□□□□ -1.73
XPAP23025 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
XPAP23025 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.24□□□□□ -1.73
XPAP23025 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.24□□□□□ -1.73
XPAP23025 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.24□□□□□ -1.73
XPAP23025 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XPAP23025 RNU1-15P-201ENST00000353977 144 ntBASIC4.24□□□□□ -1.73
XPAP23025 FRG1CP-201ENST00000358464 769 ntBASIC4.24□□□□□ -1.73
XPAP23025 RNU6-1287P-201ENST00000362914 107 ntBASIC4.24□□□□□ -1.73
XPAP23025 Y_RNA.394-201ENST00000383942 103 ntBASIC4.24□□□□□ -1.73
XPAP23025 RNU6-1060P-201ENST00000384664 107 ntBASIC4.24□□□□□ -1.73
XPAP23025 RNU6-882P-201ENST00000391025 103 ntBASIC4.24□□□□□ -1.73
XPAP23025 RNU6-550P-201ENST00000391057 101 ntBASIC4.24□□□□□ -1.73
XPAP23025 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XPAP23025 AL022722.2-201ENST00000402519 180 ntBASIC4.24□□□□□ -1.73
XPAP23025 HDGFP1-201ENST00000405943 252 ntBASIC4.24□□□□□ -1.73
XPAP23025 RPL30P2-201ENST00000414021 291 ntBASIC4.24□□□□□ -1.73
XPAP23025 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.24□□□□□ -1.73
XPAP23025 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.24□□□□□ -1.73
XPAP23025 EIF4EP1-201ENST00000422311 642 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC092017.2-201ENST00000427600 362 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC007677.1-201ENST00000445757 515 ntBASIC4.24□□□□□ -1.73
XPAP23025 ABCF2P2-201ENST00000450549 296 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC233279.1-201ENST00000455300 423 ntBASIC4.24□□□□□ -1.73
XPAP23025 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XPAP23025 AC098591.2-201ENST00000510152 315 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC099522.1-202ENST00000514718 367 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.24□□□□□ -1.73
XPAP23025 Y_RNA.701-201ENST00000516812 110 ntBASIC4.24□□□□□ -1.73
XPAP23025 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.24□□□□□ -1.73
XPAP23025 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.24□□□□□ -1.73
XPAP23025 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.24□□□□□ -1.73
XPAP23025 RPL23AP84-201ENST00000571193 464 ntBASIC4.24□□□□□ -1.73
XPAP23025 AL022099.1-201ENST00000604551 712 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC007619.2-201ENST00000605743 379 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC092807.2-201ENST00000609367 243 ntBASIC4.24□□□□□ -1.73
XPAP23025 uc_338.5-201ENST00000611839 155 ntBASIC4.24□□□□□ -1.73
XPAP23025 DUSP12P1-201ENST00000612874 516 ntBASIC4.24□□□□□ -1.73
XPAP23025 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.24□□□□□ -1.73
XPAP23025 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
XPAP23025 AC048347.1-201ENST00000624621 427 ntBASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms