Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ERCC3P19447 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ERCC3P19447 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
ERCC3P19447 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
ERCC3P19447 RNU6-45P-201ENST00000384471 107 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 RPS12P10-201ENST00000427031 377 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.22□□□□□ -1.57
ERCC3P19447 AC011998.1-201ENST00000433403 117 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.22□□□□□ -1.57
ERCC3P19447 AF228730.2-201ENST00000438784 848 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 PIGFP3-201ENST00000441918 722 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC5.22□□□□□ -1.57
ERCC3P19447 HSFY6P-201ENST00000445573 403 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.22□□□□□ -1.57
ERCC3P19447 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.22□□□□□ -1.57
ERCC3P19447 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.22□□□□□ -1.57
ERCC3P19447 RPL21P41-201ENST00000459863 264 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC087588.1-201ENST00000462203 316 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 RN7SL98P-201ENST00000462271 300 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 MTND4P17-201ENST00000470444 350 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 RPL31P13-201ENST00000484151 370 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AP002812.1-201ENST00000495378 474 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC104136.1-201ENST00000512969 394 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 APOOP4-201ENST00000513530 597 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 RNU2-69P-201ENST00000516061 100 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 SNORA31.9-201ENST00000516429 84 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 OR5D17P-201ENST00000531492 978 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.22□□□□□ -1.57
ERCC3P19447 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC5.22□□□□□ -1.57
ERCC3P19447 MIR3941-201ENST00000582572 103 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AL356055.1-201ENST00000602528 446 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC012119.1-201ENST00000603184 222 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC104662.1-201ENST00000604448 511 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC021646.1-201ENST00000605469 484 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC023043.4-201ENST00000612081 449 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 AC090574.1-201ENST00000623186 233 ntBASIC5.22□□□□□ -1.57
ERCC3P19447 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.22□□□□□ -1.57
ERCC3P19447 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.22□□□□□ -1.57
ERCC3P19447 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.22□□□□□ -1.57
ERCC3P19447 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
ERCC3P19447 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
ERCC3P19447 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
ERCC3P19447 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
ERCC3P19447 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.22□□□□□ -1.57
ERCC3P19447 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
ERCC3P19447 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ERCC3P19447 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
ERCC3P19447 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
ERCC3P19447 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.21□□□□□ -1.57
ERCC3P19447 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
ERCC3P19447 Y_RNA.245-201ENST00000364493 95 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 SNORA4.3-201ENST00000365564 137 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 MIR450B-201ENST00000401182 78 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 AL139397.2-201ENST00000404529 772 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 RN7SKP27-201ENST00000410684 333 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.21□□□□□ -1.58
ERCC3P19447 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.21□□□□□ -1.58
ERCC3P19447 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.21□□□□□ -1.58
ERCC3P19447 ISCUP1-201ENST00000454451 448 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 RNU7-167P-201ENST00000459160 62 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.21□□□□□ -1.58
ERCC3P19447 AL160314.1-201ENST00000490836 438 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 TRBVA-201ENST00000498804 316 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 RNU6-864P-201ENST00000516256 108 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 RN7SKP289-201ENST00000517244 295 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 AL352979.3-201ENST00000553515 247 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
ERCC3P19447 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.21□□□□□ -1.58
ERCC3P19447 IPO5P1-202ENST00000600039 287 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.21□□□□□ -1.58
ERCC3P19447 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.21□□□□□ -1.58
ERCC3P19447 ZYXP1-201ENST00000617638 118 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 AC103705.1-201ENST00000619013 241 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
ERCC3P19447 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ERCC3P19447 AC121333.1-201ENST00000567488 2709 ntBASIC5.21□□□□□ -1.58
ERCC3P19447 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
ERCC3P19447 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
ERCC3P19447 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 USP8P1-201ENST00000494673 3183 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.2□□□□□ -1.58
ERCC3P19447 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 RNA5SP388-201ENST00000362584 119 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 MIR493-201ENST00000385254 89 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
ERCC3P19447 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 EIF4EP1-201ENST00000422311 642 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
ERCC3P19447 GPM6BP2-201ENST00000432046 144 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.2□□□□□ -1.58
ERCC3P19447 RPL23AP89-201ENST00000439324 255 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 PHBP16-201ENST00000446318 950 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 GPM6BP1-201ENST00000446387 144 ntBASIC5.2□□□□□ -1.58
ERCC3P19447 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.2□□□□□ -1.58
ERCC3P19447 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.2□□□□□ -1.58
ERCC3P19447 OARD1-209ENST00000471367 401 ntTSL 2 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms