Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC6.68□□□□□ -1.34
CD44P16070 RPL39P40-201ENST00000445481 146 ntBASIC6.68□□□□□ -1.34
CD44P16070 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.68□□□□□ -1.34
CD44P16070 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.68□□□□□ -1.34
CD44P16070 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.68□□□□□ -1.34
CD44P16070 AL355812.1-201ENST00000603215 216 ntBASIC6.68□□□□□ -1.34
CD44P16070 SNORA43.4-201ENST00000629559 138 ntBASIC6.68□□□□□ -1.34
CD44P16070 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.68□□□□□ -1.34
CD44P16070 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CD44P16070 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.68□□□□□ -1.34
CD44P16070 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
CD44P16070 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD44P16070 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD44P16070 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
CD44P16070 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
CD44P16070 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.67□□□□□ -1.34
CD44P16070 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
CD44P16070 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
CD44P16070 RNU6-1155P-201ENST00000363554 107 ntBASIC6.67□□□□□ -1.34
CD44P16070 RNY1P1-201ENST00000364372 112 ntBASIC6.67□□□□□ -1.34
CD44P16070 Y_RNA.368-201ENST00000365547 113 ntBASIC6.67□□□□□ -1.34
CD44P16070 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 RNU6-24P-201ENST00000384440 107 ntBASIC6.67□□□□□ -1.34
CD44P16070 AC099670.2-201ENST00000435130 321 ntBASIC6.67□□□□□ -1.34
CD44P16070 AL133244.1-201ENST00000456007 258 ntBASIC6.67□□□□□ -1.34
CD44P16070 RN7SL836P-201ENST00000476140 296 ntBASIC6.67□□□□□ -1.34
CD44P16070 RPL12P30-201ENST00000488389 499 ntBASIC6.67□□□□□ -1.34
CD44P16070 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC6.67□□□□□ -1.34
CD44P16070 RN7SKP288-201ENST00000516227 268 ntBASIC6.67□□□□□ -1.34
CD44P16070 RNA5SP54-201ENST00000516951 92 ntBASIC6.67□□□□□ -1.34
CD44P16070 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.67□□□□□ -1.34
CD44P16070 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.67□□□□□ -1.34
CD44P16070 MIR4701-201ENST00000583094 63 ntBASIC6.67□□□□□ -1.34
CD44P16070 AL138693.1-201ENST00000622219 129 ntBASIC6.67□□□□□ -1.34
CD44P16070 AL035470.1-201ENST00000622571 220 ntBASIC6.67□□□□□ -1.34
CD44P16070 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.67□□□□□ -1.34
CD44P16070 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.67□□□□□ -1.34
CD44P16070 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
CD44P16070 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CD44P16070 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
CD44P16070 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD44P16070 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD44P16070 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
CD44P16070 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC6.66□□□□□ -1.34
CD44P16070 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.66□□□□□ -1.34
CD44P16070 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD44P16070 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC6.66□□□□□ -1.34
CD44P16070 RNU6-144P-201ENST00000383951 107 ntBASIC6.66□□□□□ -1.34
CD44P16070 AL035422.1-201ENST00000414193 397 ntBASIC6.66□□□□□ -1.34
CD44P16070 AC016712.1-201ENST00000431088 378 ntBASIC6.66□□□□□ -1.34
CD44P16070 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.66□□□□□ -1.34
CD44P16070 SNRPGP8-201ENST00000454064 226 ntBASIC6.66□□□□□ -1.34
CD44P16070 UBE2CP3-201ENST00000502715 450 ntBASIC6.66□□□□□ -1.34
CD44P16070 AC091826.1-201ENST00000514065 313 ntBASIC6.66□□□□□ -1.34
CD44P16070 IGKV2D-36-201ENST00000518643 226 ntBASIC6.66□□□□□ -1.34
CD44P16070 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC6.66□□□□□ -1.34
CD44P16070 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
CD44P16070 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.66□□□□□ -1.34
CD44P16070 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
CD44P16070 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD44P16070 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
CD44P16070 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.66□□□□□ -1.34
CD44P16070 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.66□□□□□ -1.34
CD44P16070 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.65□□□□□ -1.34
CD44P16070 AL355834.1-201ENST00000556602 3965 ntBASIC6.65□□□□□ -1.34
CD44P16070 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD44P16070 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.65□□□□□ -1.34
CD44P16070 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.65□□□□□ -1.34
CD44P16070 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD44P16070 MAPK10-261ENST00000641050 3109 ntBASIC6.65□□□□□ -1.34
CD44P16070 SNORA21-201ENST00000362423 132 ntBASIC6.65□□□□□ -1.34
CD44P16070 SNORA63.5-201ENST00000363548 123 ntBASIC6.65□□□□□ -1.34
CD44P16070 AL590004.2-201ENST00000404787 371 ntBASIC6.65□□□□□ -1.34
CD44P16070 RNA5SP156-201ENST00000410250 110 ntBASIC6.65□□□□□ -1.34
CD44P16070 SNORA19.1-201ENST00000410656 129 ntBASIC6.65□□□□□ -1.34
CD44P16070 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.65□□□□□ -1.34
CD44P16070 RPS12P17-201ENST00000438591 377 ntBASIC6.65□□□□□ -1.34
CD44P16070 AC130365.2-201ENST00000525882 1201 ntBASIC6.65□□□□□ -1.34
CD44P16070 AC027369.5-201ENST00000533838 755 ntBASIC6.65□□□□□ -1.34
CD44P16070 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC6.65□□□□□ -1.34
CD44P16070 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.65□□□□□ -1.34
CD44P16070 MIR6774-201ENST00000614651 70 ntBASIC6.65□□□□□ -1.34
CD44P16070 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
CD44P16070 TTC41P-205ENST00000551270 3963 ntBASIC6.65□□□□□ -1.35
CD44P16070 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
CD44P16070 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CD44P16070 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CD44P16070 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.65□□□□□ -1.35
CD44P16070 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
CD44P16070 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC6.65□□□□□ -1.35
CD44P16070 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
CD44P16070 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD44P16070 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
CD44P16070 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
CD44P16070 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms